Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RN7SL219P-201ENST00000582872 296 ntBASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 AC097359.3-201ENST00000603982 1210 ntBASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 AL607033.1-201ENST00000623900 1599 ntBASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 AC092933.1-201ENST00000393644 945 ntBASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 HYMAI-201ENST00000635591 3347 ntBASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 LINC00554-201ENST00000564841 3011 ntBASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SSX2IPQ9Y2D8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 AC099063.4-201ENST00000641099 1602 ntBASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 BRWD1P1-201ENST00000401091 371 ntBASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 AC099336.1-201ENST00000417053 1171 ntBASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 AC093433.1-201ENST00000458048 571 ntBASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 AC026410.3-201ENST00000514280 936 ntBASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms