Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 ACTBP11-201ENST00000436287 1126 ntBASIC15.25■□□□□ 0.03
SATB2Q9UPW6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 AC133539.2-201ENST00000604757 467 ntBASIC15.25■□□□□ 0.03
SATB2Q9UPW6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 GPR182-203ENST00000622922 591 ntBASIC15.25■□□□□ 0.03
SATB2Q9UPW6 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.25■□□□□ 0.03
SATB2Q9UPW6 AL133338.1-201ENST00000565695 1517 ntBASIC15.25■□□□□ 0.03
SATB2Q9UPW6 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 Z97205.2-201ENST00000564697 1639 ntBASIC15.25■□□□□ 0.03
SATB2Q9UPW6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 CICP14-201ENST00000629111 2732 ntBASIC15.24■□□□□ 0.03
SATB2Q9UPW6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.24■□□□□ 0.03
SATB2Q9UPW6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 TDH-203ENST00000531764 1110 ntBASIC15.24■□□□□ 0.03
SATB2Q9UPW6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 AL158212.4-201ENST00000624062 1286 ntBASIC15.24■□□□□ 0.03
SATB2Q9UPW6 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 AC079328.2-201ENST00000561241 3354 ntBASIC15.24■□□□□ 0.03
SATB2Q9UPW6 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SATB2Q9UPW6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 AC093525.8-201ENST00000624099 1342 ntBASIC15.23■□□□□ 0.03
SATB2Q9UPW6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 AL442647.2-201ENST00000429864 857 ntBASIC15.23■□□□□ 0.03
SATB2Q9UPW6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.23■□□□□ 0.03
SATB2Q9UPW6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms