Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.14■□□□□ 0.17
SMOQ99835 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.14■□□□□ 0.17
SMOQ99835 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.14■□□□□ 0.17
SMOQ99835 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.14■□□□□ 0.17
SMOQ99835 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 AC244669.2-201ENST00000612320 853 ntBASIC16.14■□□□□ 0.17
SMOQ99835 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SMOQ99835 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.14■□□□□ 0.17
SMOQ99835 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SMOQ99835 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.14■□□□□ 0.17
SMOQ99835 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SMOQ99835 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 PDIA3P1-201ENST00000471856 1510 ntBASIC16.14■□□□□ 0.17
SMOQ99835 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.14■□□□□ 0.17
SMOQ99835 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.13■□□□□ 0.17
SMOQ99835 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.13■□□□□ 0.17
SMOQ99835 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
SMOQ99835 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SMOQ99835 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 AL157414.3-201ENST00000624276 1954 ntBASIC16.13■□□□□ 0.17
SMOQ99835 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SMOQ99835 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.13■□□□□ 0.17
SMOQ99835 KRT8P14-201ENST00000414254 1442 ntBASIC16.13■□□□□ 0.17
SMOQ99835 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SMOQ99835 AC138035.3-201ENST00000622706 2791 ntBASIC16.13■□□□□ 0.17
SMOQ99835 AL162727.3-201ENST00000635661 2787 ntBASIC16.13■□□□□ 0.17
SMOQ99835 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.13■□□□□ 0.17
SMOQ99835 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.13■□□□□ 0.17
SMOQ99835 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.13■□□□□ 0.17
SMOQ99835 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.13■□□□□ 0.17
SMOQ99835 AC234783.1-201ENST00000441761 496 ntBASIC16.13■□□□□ 0.17
SMOQ99835 AC022210.1-201ENST00000449856 793 ntBASIC16.13■□□□□ 0.17
SMOQ99835 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.13■□□□□ 0.17
SMOQ99835 AC119751.2-201ENST00000504529 210 ntBASIC16.13■□□□□ 0.17
SMOQ99835 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SMOQ99835 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.13■□□□□ 0.17
SMOQ99835 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.13■□□□□ 0.17
SMOQ99835 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SMOQ99835 MIR6775-201ENST00000617557 69 ntBASIC16.13■□□□□ 0.17
SMOQ99835 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.13■□□□□ 0.17
SMOQ99835 AL138709.1-201ENST00000614840 1693 ntBASIC16.13■□□□□ 0.17
SMOQ99835 REXO1L5P-201ENST00000622260 2098 ntBASIC16.13■□□□□ 0.17
SMOQ99835 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.13■□□□□ 0.17
SMOQ99835 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMOQ99835 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.13■□□□□ 0.17
SMOQ99835 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.12■□□□□ 0.17
SMOQ99835 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SMOQ99835 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.12■□□□□ 0.17
SMOQ99835 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SMOQ99835 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.12■□□□□ 0.17
SMOQ99835 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.12■□□□□ 0.17
SMOQ99835 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.12■□□□□ 0.17
SMOQ99835 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SMOQ99835 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SMOQ99835 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.12■□□□□ 0.17
SMOQ99835 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.12■□□□□ 0.17
SMOQ99835 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms