Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
RNF183Q96D59 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.59□□□□□ -0.55
RNF183Q96D59 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RNF183Q96D59 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
RNF183Q96D59 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RNF183Q96D59 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RNF183Q96D59 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
RNF183Q96D59 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RNF183Q96D59 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
RNF183Q96D59 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RNF183Q96D59 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RNF183Q96D59 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RNF183Q96D59 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RNF183Q96D59 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RNF183Q96D59 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
RNF183Q96D59 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
RNF183Q96D59 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
RNF183Q96D59 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
RNF183Q96D59 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
RNF183Q96D59 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
RNF183Q96D59 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RNF183Q96D59 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RNF183Q96D59 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.59□□□□□ -0.55
RNF183Q96D59 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
RNF183Q96D59 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
RNF183Q96D59 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
RNF183Q96D59 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
RNF183Q96D59 BNIP3P1-202ENST00000550043 1585 ntBASIC11.58□□□□□ -0.55
RNF183Q96D59 AC006449.6-201ENST00000612330 2296 ntBASIC11.58□□□□□ -0.55
RNF183Q96D59 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RNF183Q96D59 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.58□□□□□ -0.56
RNF183Q96D59 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
RNF183Q96D59 Z97205.2-201ENST00000564697 1639 ntBASIC11.58□□□□□ -0.56
RNF183Q96D59 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.58□□□□□ -0.56
RNF183Q96D59 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 AC098614.1-201ENST00000368528 745 ntBASIC11.58□□□□□ -0.56
RNF183Q96D59 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.58□□□□□ -0.56
RNF183Q96D59 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.58□□□□□ -0.56
RNF183Q96D59 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.58□□□□□ -0.56
RNF183Q96D59 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.58□□□□□ -0.56
RNF183Q96D59 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC11.58□□□□□ -0.56
RNF183Q96D59 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 MEIS3P1-201ENST00000495167 958 ntBASIC11.58□□□□□ -0.56
RNF183Q96D59 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.58□□□□□ -0.56
RNF183Q96D59 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.58□□□□□ -0.56
RNF183Q96D59 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
RNF183Q96D59 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.58□□□□□ -0.56
RNF183Q96D59 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.58□□□□□ -0.56
RNF183Q96D59 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.58□□□□□ -0.56
RNF183Q96D59 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 AC099568.2-201ENST00000609194 695 ntBASIC11.58□□□□□ -0.56
RNF183Q96D59 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RNF183Q96D59 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
RNF183Q96D59 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms