Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 RPL7P35-201ENST00000446943 740 ntBASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 KLF2P1-201ENST00000447438 1042 ntBASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 AC026434.2-201ENST00000506094 1078 ntBASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 INE2-201ENST00000630399 1874 ntBASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 AC009093.2-202ENST00000620513 2079 ntBASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 AC010141.1-201ENST00000411585 623 ntBASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 POU5F1P2-201ENST00000521750 823 ntBASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 AP002803.1-201ENST00000528836 498 ntBASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 AC008805.1-201ENST00000590892 364 ntBASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 REXO1L5P-201ENST00000622260 2098 ntBASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM43Q96BQ3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 AC124067.4-201ENST00000519691 2379 ntBASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms