Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKAP2Q8WWK9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 HCG4B-203ENST00000450128 991 ntBASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 AL139010.1-201ENST00000454878 894 ntBASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 LINC01711-201ENST00000598340 967 ntBASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 AL161645.1-201ENST00000622716 1255 ntBASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKAP2Q8WWK9 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 AC097376.2-205ENST00000610159 5334 ntBASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 TPM4P1-201ENST00000436100 807 ntBASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 AC105233.2-201ENST00000523697 349 ntBASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 AF228730.5-201ENST00000530288 346 ntBASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms