Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 DDX39AP1-201ENST00000445147 1181 ntBASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 POU5F1P6-201ENST00000466990 990 ntBASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 POU5F1P2-201ENST00000521750 823 ntBASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 AL160314.3-201ENST00000556041 767 ntBASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 AC097359.3-201ENST00000603982 1210 ntBASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO4Q2I0M5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 AC124067.4-201ENST00000519691 2379 ntBASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 AP003171.2-201ENST00000528208 925 ntBASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 AP003398.1-201ENST00000531124 318 ntBASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms