Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
SCN7AQ01118 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN7AQ01118 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.79■□□□□ 0.6
SCN7AQ01118 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.79■□□□□ 0.6
SCN7AQ01118 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.79■□□□□ 0.6
SCN7AQ01118 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN7AQ01118 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN7AQ01118 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCN7AQ01118 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SCN7AQ01118 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SCN7AQ01118 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCN7AQ01118 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN7AQ01118 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SCN7AQ01118 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN7AQ01118 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.79■□□□□ 0.6
SCN7AQ01118 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCN7AQ01118 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCN7AQ01118 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN7AQ01118 AL627389.1-201ENST00000413508 1182 ntBASIC18.79■□□□□ 0.6
SCN7AQ01118 RPSAP31-201ENST00000416648 895 ntBASIC18.79■□□□□ 0.6
SCN7AQ01118 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN7AQ01118 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.79■□□□□ 0.6
SCN7AQ01118 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
SCN7AQ01118 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.79■□□□□ 0.6
SCN7AQ01118 COX6A1P2-201ENST00000620597 330 ntBASIC18.79■□□□□ 0.6
SCN7AQ01118 AL353726.2-201ENST00000623259 884 ntBASIC18.79■□□□□ 0.6
SCN7AQ01118 AC011491.1-203ENST00000637688 543 ntBASIC18.79■□□□□ 0.6
SCN7AQ01118 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN7AQ01118 AC018629.1-201ENST00000623381 1736 ntBASIC18.79■□□□□ 0.6
SCN7AQ01118 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN7AQ01118 LTB4R2-202ENST00000528054 3092 ntBASIC18.79■□□□□ 0.6
SCN7AQ01118 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SCN7AQ01118 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SCN7AQ01118 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 OR2K2-202ENST00000374428 1038 ntBASIC18.78■□□□□ 0.6
SCN7AQ01118 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.78■□□□□ 0.6
SCN7AQ01118 AC098935.1-201ENST00000446057 611 ntBASIC18.78■□□□□ 0.6
SCN7AQ01118 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.78■□□□□ 0.6
SCN7AQ01118 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.78■□□□□ 0.6
SCN7AQ01118 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.78■□□□□ 0.6
SCN7AQ01118 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SCN7AQ01118 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.78■□□□□ 0.6
SCN7AQ01118 AL391005.1-201ENST00000623953 2435 ntBASIC18.78■□□□□ 0.6
SCN7AQ01118 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SCN7AQ01118 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.78■□□□□ 0.6
SCN7AQ01118 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SCN7AQ01118 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN7AQ01118 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.78■□□□□ 0.6
SCN7AQ01118 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN7AQ01118 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SCN7AQ01118 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SCN7AQ01118 AL355334.1-201ENST00000417713 215 ntBASIC18.77■□□□□ 0.6
SCN7AQ01118 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC18.77■□□□□ 0.6
SCN7AQ01118 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.77■□□□□ 0.6
SCN7AQ01118 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN7AQ01118 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SCN7AQ01118 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.77■□□□□ 0.6
SCN7AQ01118 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN7AQ01118 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN7AQ01118 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN7AQ01118 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN7AQ01118 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SCN7AQ01118 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SCN7AQ01118 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.77■□□□□ 0.59
SCN7AQ01118 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SCN7AQ01118 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SCN7AQ01118 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN7AQ01118 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SCN7AQ01118 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms