Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 TCAF1P1-201ENST00000414990 2232 ntBASIC14.79□□□□□ -0.04
NR1H2P55055 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NR1H2P55055 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
NR1H2P55055 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NR1H2P55055 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NR1H2P55055 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
NR1H2P55055 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.79□□□□□ -0.04
NR1H2P55055 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.79□□□□□ -0.04
NR1H2P55055 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.79□□□□□ -0.04
NR1H2P55055 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 AP002472.1-201ENST00000577490 586 ntBASIC14.79□□□□□ -0.04
NR1H2P55055 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.79□□□□□ -0.04
NR1H2P55055 AC011477.6-201ENST00000604980 1927 ntBASIC14.79□□□□□ -0.04
NR1H2P55055 AC020765.3-201ENST00000613051 740 ntBASIC14.79□□□□□ -0.04
NR1H2P55055 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.79□□□□□ -0.04
NR1H2P55055 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.79□□□□□ -0.04
NR1H2P55055 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.79□□□□□ -0.04
NR1H2P55055 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.79□□□□□ -0.04
NR1H2P55055 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NR1H2P55055 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.79□□□□□ -0.04
NR1H2P55055 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.79□□□□□ -0.04
NR1H2P55055 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
NR1H2P55055 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NR1H2P55055 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H2P55055 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.78□□□□□ -0.04
NR1H2P55055 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NR1H2P55055 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NR1H2P55055 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 AC007326.2-201ENST00000624224 7579 ntBASIC14.78□□□□□ -0.04
NR1H2P55055 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.78□□□□□ -0.04
NR1H2P55055 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H2P55055 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.78□□□□□ -0.04
NR1H2P55055 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
NR1H2P55055 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 AC002056.1-201ENST00000395613 760 ntBASIC14.78□□□□□ -0.04
NR1H2P55055 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NR1H2P55055 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NR1H2P55055 AL031432.2-201ENST00000566714 459 ntBASIC14.78□□□□□ -0.04
NR1H2P55055 AL928711.1-201ENST00000570165 459 ntBASIC14.78□□□□□ -0.04
NR1H2P55055 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H2P55055 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.78□□□□□ -0.04
NR1H2P55055 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.78□□□□□ -0.04
NR1H2P55055 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NR1H2P55055 REXO1L3P-201ENST00000622202 1288 ntBASIC14.78□□□□□ -0.04
NR1H2P55055 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.78□□□□□ -0.04
NR1H2P55055 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.78□□□□□ -0.04
NR1H2P55055 AL645728.2-201ENST00000641974 660 ntBASIC14.78□□□□□ -0.04
NR1H2P55055 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 DGCR9-201ENST00000609630 2415 ntBASIC14.78□□□□□ -0.04
NR1H2P55055 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NR1H2P55055 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H2P55055 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NR1H2P55055 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H2P55055 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H2P55055 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H2P55055 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.77□□□□□ -0.04
NR1H2P55055 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NR1H2P55055 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
NR1H2P55055 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
NR1H2P55055 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.77□□□□□ -0.04
NR1H2P55055 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NR1H2P55055 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
NR1H2P55055 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.77□□□□□ -0.04
NR1H2P55055 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H2P55055 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H2P55055 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H2P55055 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H2P55055 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H2P55055 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.77□□□□□ -0.04
NR1H2P55055 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H2P55055 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H2P55055 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms