Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PDE1AP54750 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE1AP54750 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDE1AP54750 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.85■□□□□ 0.61
PDE1AP54750 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PDE1AP54750 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.85■□□□□ 0.61
PDE1AP54750 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.85■□□□□ 0.61
PDE1AP54750 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDE1AP54750 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE1AP54750 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 SPCS2P1-201ENST00000561636 679 ntBASIC18.85■□□□□ 0.61
PDE1AP54750 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.85■□□□□ 0.61
PDE1AP54750 AL096865.1-201ENST00000606796 927 ntBASIC18.85■□□□□ 0.61
PDE1AP54750 AC107373.2-201ENST00000607735 490 ntBASIC18.85■□□□□ 0.61
PDE1AP54750 AC099568.2-201ENST00000609194 695 ntBASIC18.85■□□□□ 0.61
PDE1AP54750 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE1AP54750 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.85■□□□□ 0.61
PDE1AP54750 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
PDE1AP54750 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE1AP54750 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PDE1AP54750 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE1AP54750 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE1AP54750 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE1AP54750 AC007787.1-201ENST00000588095 1583 ntBASIC18.85■□□□□ 0.61
PDE1AP54750 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE1AP54750 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PDE1AP54750 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 LINC01101-201ENST00000622953 1884 ntBASIC18.84■□□□□ 0.61
PDE1AP54750 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PDE1AP54750 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PDE1AP54750 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PDE1AP54750 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
PDE1AP54750 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE1AP54750 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE1AP54750 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.84■□□□□ 0.61
PDE1AP54750 VDAC1P7-201ENST00000462417 847 ntBASIC18.84■□□□□ 0.61
PDE1AP54750 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE1AP54750 AC055876.2-201ENST00000531834 546 ntBASIC18.84■□□□□ 0.61
PDE1AP54750 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.84■□□□□ 0.61
PDE1AP54750 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE1AP54750 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.84■□□□□ 0.61
PDE1AP54750 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE1AP54750 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE1AP54750 FGD5P1-202ENST00000614866 2498 ntBASIC18.84■□□□□ 0.61
PDE1AP54750 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE1AP54750 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE1AP54750 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PDE1AP54750 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE1AP54750 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE1AP54750 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE1AP54750 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDE1AP54750 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDE1AP54750 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDE1AP54750 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PDE1AP54750 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.83■□□□□ 0.61
PDE1AP54750 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.83■□□□□ 0.61
PDE1AP54750 AC093525.8-201ENST00000624099 1342 ntBASIC18.83■□□□□ 0.61
PDE1AP54750 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDE1AP54750 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDE1AP54750 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE1AP54750 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE1AP54750 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PDE1AP54750 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE1AP54750 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE1AP54750 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE1AP54750 AC098850.1-201ENST00000419919 790 ntBASIC18.83■□□□□ 0.6
PDE1AP54750 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.83■□□□□ 0.6
PDE1AP54750 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.83■□□□□ 0.6
PDE1AP54750 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.83■□□□□ 0.6
PDE1AP54750 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.83■□□□□ 0.6
PDE1AP54750 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.83■□□□□ 0.6
PDE1AP54750 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms