Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.77□□□□□ -0.21
LHX2P50458 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.77□□□□□ -0.21
LHX2P50458 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.77□□□□□ -0.21
LHX2P50458 CTBP2P5-201ENST00000454986 1264 ntBASIC13.77□□□□□ -0.21
LHX2P50458 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.77□□□□□ -0.21
LHX2P50458 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.77□□□□□ -0.21
LHX2P50458 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.77□□□□□ -0.21
LHX2P50458 AP005482.1-201ENST00000563722 1273 ntBASIC13.77□□□□□ -0.21
LHX2P50458 MIR4259-201ENST00000584466 101 ntBASIC13.77□□□□□ -0.21
LHX2P50458 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.77□□□□□ -0.21
LHX2P50458 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.77□□□□□ -0.21
LHX2P50458 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.77□□□□□ -0.21
LHX2P50458 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LHX2P50458 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.77□□□□□ -0.21
LHX2P50458 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.77□□□□□ -0.21
LHX2P50458 AC145423.3-201ENST00000615987 467 ntBASIC13.77□□□□□ -0.21
LHX2P50458 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LHX2P50458 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LHX2P50458 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.77□□□□□ -0.21
LHX2P50458 COX11-210ENST00000639671 696 ntBASIC13.77□□□□□ -0.21
LHX2P50458 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LHX2P50458 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LHX2P50458 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LHX2P50458 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LHX2P50458 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LHX2P50458 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
LHX2P50458 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.76□□□□□ -0.21
LHX2P50458 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.76□□□□□ -0.21
LHX2P50458 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.76□□□□□ -0.21
LHX2P50458 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.76□□□□□ -0.21
LHX2P50458 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LHX2P50458 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LHX2P50458 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LHX2P50458 GHSR-202ENST00000427970 912 ntBASIC13.76□□□□□ -0.21
LHX2P50458 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 RPL7P3-201ENST00000441388 714 ntBASIC13.76□□□□□ -0.21
LHX2P50458 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
LHX2P50458 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
LHX2P50458 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.76□□□□□ -0.21
LHX2P50458 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.76□□□□□ -0.21
LHX2P50458 AP000812.2-201ENST00000538934 718 ntBASIC13.76□□□□□ -0.21
LHX2P50458 AC025279.2-201ENST00000569730 653 ntBASIC13.76□□□□□ -0.21
LHX2P50458 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.76□□□□□ -0.21
LHX2P50458 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LHX2P50458 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.76□□□□□ -0.21
LHX2P50458 AC244669.2-201ENST00000612320 853 ntBASIC13.76□□□□□ -0.21
LHX2P50458 AC133552.6-201ENST00000613406 534 ntBASIC13.76□□□□□ -0.21
LHX2P50458 MIR6752-201ENST00000618442 71 ntBASIC13.76□□□□□ -0.21
LHX2P50458 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 AC136621.1-201ENST00000624017 2304 ntBASIC13.76□□□□□ -0.21
LHX2P50458 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.76□□□□□ -0.21
LHX2P50458 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.76□□□□□ -0.21
LHX2P50458 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LHX2P50458 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.76□□□□□ -0.21
LHX2P50458 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LHX2P50458 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LHX2P50458 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LHX2P50458 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LHX2P50458 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.75□□□□□ -0.21
LHX2P50458 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LHX2P50458 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LHX2P50458 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LHX2P50458 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LHX2P50458 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
LHX2P50458 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LHX2P50458 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LHX2P50458 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LHX2P50458 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.75□□□□□ -0.21
LHX2P50458 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.75□□□□□ -0.21
LHX2P50458 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.75□□□□□ -0.21
LHX2P50458 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms