Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 MST1L-201ENST00000442552 2185 ntBASIC14.6□□□□□ -0.07
GABRA4P48169 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GABRA4P48169 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRA4P48169 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
GABRA4P48169 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
GABRA4P48169 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRA4P48169 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRA4P48169 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 CICP11-201ENST00000434745 2827 ntBASIC14.59□□□□□ -0.07
GABRA4P48169 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
GABRA4P48169 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRA4P48169 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
GABRA4P48169 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRA4P48169 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.59□□□□□ -0.07
GABRA4P48169 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRA4P48169 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRA4P48169 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 HLA-K-203ENST00000430151 1046 ntBASIC14.59□□□□□ -0.07
GABRA4P48169 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRA4P48169 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.59□□□□□ -0.07
GABRA4P48169 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 BNIP3P42-201ENST00000454982 569 ntBASIC14.59□□□□□ -0.07
GABRA4P48169 FO681548.1-201ENST00000455617 1132 ntBASIC14.59□□□□□ -0.07
GABRA4P48169 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
GABRA4P48169 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.59□□□□□ -0.07
GABRA4P48169 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.59□□□□□ -0.07
GABRA4P48169 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.59□□□□□ -0.07
GABRA4P48169 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRA4P48169 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.59□□□□□ -0.07
GABRA4P48169 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
GABRA4P48169 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.59□□□□□ -0.07
GABRA4P48169 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.59□□□□□ -0.07
GABRA4P48169 BNIP3P29-201ENST00000598302 571 ntBASIC14.59□□□□□ -0.07
GABRA4P48169 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
GABRA4P48169 AC011447.5-201ENST00000616168 564 ntBASIC14.59□□□□□ -0.07
GABRA4P48169 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRA4P48169 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
GABRA4P48169 AC112693.3-201ENST00000624819 1983 ntBASIC14.59□□□□□ -0.07
GABRA4P48169 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRA4P48169 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRA4P48169 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRA4P48169 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRA4P48169 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
GABRA4P48169 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRA4P48169 AC087481.3-201ENST00000602886 1894 ntBASIC14.59□□□□□ -0.07
GABRA4P48169 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRA4P48169 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.58□□□□□ -0.07
GABRA4P48169 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GABRA4P48169 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.58□□□□□ -0.07
GABRA4P48169 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.58□□□□□ -0.07
GABRA4P48169 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GABRA4P48169 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
GABRA4P48169 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
GABRA4P48169 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.58□□□□□ -0.07
GABRA4P48169 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.58□□□□□ -0.07
GABRA4P48169 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
GABRA4P48169 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.58□□□□□ -0.08
GABRA4P48169 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.58□□□□□ -0.08
GABRA4P48169 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.58□□□□□ -0.08
GABRA4P48169 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.58□□□□□ -0.08
GABRA4P48169 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
GABRA4P48169 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
GABRA4P48169 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.58□□□□□ -0.08
GABRA4P48169 AL596257.1-201ENST00000641463 2694 ntBASIC14.58□□□□□ -0.08
GABRA4P48169 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.58□□□□□ -0.08
GABRA4P48169 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
GABRA4P48169 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.58□□□□□ -0.08
GABRA4P48169 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
GABRA4P48169 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.58□□□□□ -0.08
GABRA4P48169 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.58□□□□□ -0.08
GABRA4P48169 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 EIF3FP3-201ENST00000434851 1086 ntBASIC14.58□□□□□ -0.08
GABRA4P48169 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
GABRA4P48169 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.58□□□□□ -0.08
GABRA4P48169 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
GABRA4P48169 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
GABRA4P48169 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.58□□□□□ -0.08
GABRA4P48169 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.58□□□□□ -0.08
GABRA4P48169 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms