Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
NEDD4P46934 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.15■□□□□ 0.5
NEDD4P46934 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.15■□□□□ 0.5
NEDD4P46934 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NEDD4P46934 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.15■□□□□ 0.5
NEDD4P46934 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NEDD4P46934 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NEDD4P46934 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
NEDD4P46934 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.14■□□□□ 0.5
NEDD4P46934 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
NEDD4P46934 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.14■□□□□ 0.49
NEDD4P46934 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NEDD4P46934 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NEDD4P46934 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.14■□□□□ 0.49
NEDD4P46934 AC093433.1-201ENST00000458048 571 ntBASIC18.14■□□□□ 0.49
NEDD4P46934 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.14■□□□□ 0.49
NEDD4P46934 GIMAP3P-201ENST00000495150 836 ntBASIC18.14■□□□□ 0.49
NEDD4P46934 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.14■□□□□ 0.49
NEDD4P46934 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.14■□□□□ 0.49
NEDD4P46934 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.14■□□□□ 0.49
NEDD4P46934 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.14■□□□□ 0.49
NEDD4P46934 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NEDD4P46934 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.14■□□□□ 0.49
NEDD4P46934 BX539320.1-201ENST00000623759 877 ntBASIC18.14■□□□□ 0.49
NEDD4P46934 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NEDD4P46934 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NEDD4P46934 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.14■□□□□ 0.49
NEDD4P46934 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.14■□□□□ 0.49
NEDD4P46934 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.14■□□□□ 0.49
NEDD4P46934 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NEDD4P46934 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEDD4P46934 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
NEDD4P46934 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.14■□□□□ 0.49
NEDD4P46934 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 MROH4P-201ENST00000431302 1578 ntBASIC18.13■□□□□ 0.49
NEDD4P46934 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
NEDD4P46934 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NEDD4P46934 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.13■□□□□ 0.49
NEDD4P46934 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NEDD4P46934 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NEDD4P46934 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
NEDD4P46934 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.13■□□□□ 0.49
NEDD4P46934 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.13■□□□□ 0.49
NEDD4P46934 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.13■□□□□ 0.49
NEDD4P46934 HLA-K-203ENST00000430151 1046 ntBASIC18.13■□□□□ 0.49
NEDD4P46934 KRT17P7-201ENST00000451704 1104 ntBASIC18.13■□□□□ 0.49
NEDD4P46934 AC007389.4-201ENST00000454674 793 ntBASIC18.13■□□□□ 0.49
NEDD4P46934 TDH-203ENST00000531764 1110 ntBASIC18.13■□□□□ 0.49
NEDD4P46934 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.13■□□□□ 0.49
NEDD4P46934 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.13■□□□□ 0.49
NEDD4P46934 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.13■□□□□ 0.49
NEDD4P46934 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.13■□□□□ 0.49
NEDD4P46934 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.13■□□□□ 0.49
NEDD4P46934 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NEDD4P46934 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.13■□□□□ 0.49
NEDD4P46934 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.13■□□□□ 0.49
NEDD4P46934 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NEDD4P46934 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEDD4P46934 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms