Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HOXC6P09630 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
HOXC6P09630 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.3■□□□□ 0.36
HOXC6P09630 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXC6P09630 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HOXC6P09630 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC6P09630 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC6P09630 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC6P09630 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC6P09630 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC6P09630 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXC6P09630 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HOXC6P09630 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC6P09630 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.3■□□□□ 0.36
HOXC6P09630 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC6P09630 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HOXC6P09630 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXC6P09630 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC6P09630 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC6P09630 LINC02199-201ENST00000506655 2702 ntBASIC17.29■□□□□ 0.36
HOXC6P09630 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HOXC6P09630 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC6P09630 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC6P09630 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HOXC6P09630 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC6P09630 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC6P09630 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC6P09630 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC6P09630 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC6P09630 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.29■□□□□ 0.36
HOXC6P09630 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC6P09630 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.29■□□□□ 0.36
HOXC6P09630 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC6P09630 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC6P09630 AC138466.3-201ENST00000619983 221 ntBASIC17.29■□□□□ 0.36
HOXC6P09630 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC6P09630 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
HOXC6P09630 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC6P09630 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC6P09630 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC6P09630 AC010491.1-201ENST00000563101 2797 ntBASIC17.28■□□□□ 0.36
HOXC6P09630 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HOXC6P09630 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC6P09630 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HOXC6P09630 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HOXC6P09630 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC6P09630 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HOXC6P09630 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HOXC6P09630 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 AC091046.1-201ENST00000331871 207 ntBASIC17.28■□□□□ 0.36
HOXC6P09630 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
HOXC6P09630 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXC6P09630 RPS2P36-201ENST00000456516 831 ntBASIC17.28■□□□□ 0.36
HOXC6P09630 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.28■□□□□ 0.36
HOXC6P09630 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 MESTP3-201ENST00000503460 968 ntBASIC17.28■□□□□ 0.36
HOXC6P09630 FTLP10-202ENST00000505798 471 ntBASIC17.28■□□□□ 0.36
HOXC6P09630 AC005740.2-201ENST00000511085 419 ntBASIC17.28■□□□□ 0.36
HOXC6P09630 DUX4L47-201ENST00000566374 394 ntBASIC17.28■□□□□ 0.36
HOXC6P09630 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
HOXC6P09630 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.28■□□□□ 0.36
HOXC6P09630 MIR6727-201ENST00000620702 65 ntBASIC17.28■□□□□ 0.36
HOXC6P09630 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
HOXC6P09630 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC6P09630 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms