Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 CTBP1-AS2-206ENST00000581398 5652 ntBASIC17.44■□□□□ 0.38
TPM3P06753 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM3P06753 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
TPM3P06753 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.44■□□□□ 0.38
TPM3P06753 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM3P06753 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.44■□□□□ 0.38
TPM3P06753 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 SPTSSB-204ENST00000617024 1292 ntBASIC17.44■□□□□ 0.38
TPM3P06753 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 AC015656.1-201ENST00000624209 3578 ntBASIC17.44■□□□□ 0.38
TPM3P06753 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM3P06753 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TPM3P06753 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 LINC01230-201ENST00000625222 3017 ntBASIC17.44■□□□□ 0.38
TPM3P06753 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TPM3P06753 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM3P06753 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TPM3P06753 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM3P06753 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TPM3P06753 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM3P06753 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM3P06753 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM3P06753 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM3P06753 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TPM3P06753 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TPM3P06753 AC105233.2-201ENST00000523697 349 ntBASIC17.43■□□□□ 0.38
TPM3P06753 AF228730.5-201ENST00000530288 346 ntBASIC17.43■□□□□ 0.38
TPM3P06753 AC073389.1-201ENST00000595595 795 ntBASIC17.43■□□□□ 0.38
TPM3P06753 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.43■□□□□ 0.38
TPM3P06753 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.43■□□□□ 0.38
TPM3P06753 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM3P06753 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM3P06753 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM3P06753 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM3P06753 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM3P06753 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
TPM3P06753 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
TPM3P06753 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TPM3P06753 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TPM3P06753 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM3P06753 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TPM3P06753 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM3P06753 DKFZP434A062-201ENST00000573103 5021 ntBASIC17.42■□□□□ 0.38
TPM3P06753 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM3P06753 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TPM3P06753 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms