Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC19.87■□□□□ 0.77
COL5A2P05997 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
COL5A2P05997 AP000356.3-201ENST00000382243 753 ntBASIC19.87■□□□□ 0.77
COL5A2P05997 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC19.87■□□□□ 0.77
COL5A2P05997 AL157407.1-201ENST00000435784 904 ntBASIC19.87■□□□□ 0.77
COL5A2P05997 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC19.87■□□□□ 0.77
COL5A2P05997 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.87■□□□□ 0.77
COL5A2P05997 CCNC-217ENST00000523985 958 ntTSL 2 BASIC19.87■□□□□ 0.77
COL5A2P05997 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC19.87■□□□□ 0.77
COL5A2P05997 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.87■□□□□ 0.77
COL5A2P05997 AC009084.3-201ENST00000623356 437 ntBASIC19.87■□□□□ 0.77
COL5A2P05997 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19.87■□□□□ 0.77
COL5A2P05997 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.87■□□□□ 0.77
COL5A2P05997 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.87■□□□□ 0.77
COL5A2P05997 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.87■□□□□ 0.77
COL5A2P05997 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.87■□□□□ 0.77
COL5A2P05997 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC19.87■□□□□ 0.77
COL5A2P05997 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.87■□□□□ 0.77
COL5A2P05997 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 AC024909.3-201ENST00000611513 2257 ntBASIC19.87■□□□□ 0.77
COL5A2P05997 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL5A2P05997 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC19.86■□□□□ 0.77
COL5A2P05997 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC19.86■□□□□ 0.77
COL5A2P05997 ALG3P1-201ENST00000508806 1114 ntBASIC19.86■□□□□ 0.77
COL5A2P05997 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC19.86■□□□□ 0.77
COL5A2P05997 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC19.86■□□□□ 0.77
COL5A2P05997 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC19.86■□□□□ 0.77
COL5A2P05997 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC19.86■□□□□ 0.77
COL5A2P05997 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL5A2P05997 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.86■□□□□ 0.77
COL5A2P05997 CYP4F23P-201ENST00000593402 1579 ntBASIC19.86■□□□□ 0.77
COL5A2P05997 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COL5A2P05997 AC025271.4-201ENST00000621477 1726 ntBASIC19.86■□□□□ 0.77
COL5A2P05997 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COL5A2P05997 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 NCR3-202ENST00000376071 541 ntTSL 5 BASIC19.86■□□□□ 0.77
COL5A2P05997 AL512430.1-201ENST00000392575 860 ntBASIC19.86■□□□□ 0.77
COL5A2P05997 AC097065.1-201ENST00000425737 517 ntBASIC19.86■□□□□ 0.77
COL5A2P05997 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC19.86■□□□□ 0.77
COL5A2P05997 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 RPL18AP3-201ENST00000462885 528 ntBASIC19.86■□□□□ 0.77
COL5A2P05997 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.86■□□□□ 0.77
COL5A2P05997 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC19.86■□□□□ 0.77
COL5A2P05997 RBM8B-201ENST00000555532 525 ntBASIC19.86■□□□□ 0.77
COL5A2P05997 PHBP15-201ENST00000574228 665 ntBASIC19.86■□□□□ 0.77
COL5A2P05997 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL5A2P05997 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.86■□□□□ 0.77
COL5A2P05997 HPN-206ENST00000597419 1212 ntTSL 5 BASIC19.86■□□□□ 0.77
COL5A2P05997 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.86■□□□□ 0.77
COL5A2P05997 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC19.86■□□□□ 0.77
COL5A2P05997 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.85■□□□□ 0.77
COL5A2P05997 FRMPD2B-201ENST00000431305 1347 ntBASIC19.85■□□□□ 0.77
COL5A2P05997 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC19.85■□□□□ 0.77
COL5A2P05997 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
COL5A2P05997 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC19.85■□□□□ 0.77
COL5A2P05997 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.85■□□□□ 0.77
COL5A2P05997 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.85■□□□□ 0.77
COL5A2P05997 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.85■□□□□ 0.77
COL5A2P05997 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.85■□□□□ 0.77
COL5A2P05997 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
COL5A2P05997 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
COL5A2P05997 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.85■□□□□ 0.77
COL5A2P05997 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC19.85■□□□□ 0.77
COL5A2P05997 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms