Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BEST1O76090 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
BEST1O76090 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
BEST1O76090 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
BEST1O76090 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
BEST1O76090 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
BEST1O76090 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST1O76090 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BEST1O76090 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST1O76090 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
BEST1O76090 ANKRD19P-201ENST00000338192 862 ntBASIC16.17■□□□□ 0.18
BEST1O76090 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.17■□□□□ 0.18
BEST1O76090 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.17■□□□□ 0.18
BEST1O76090 GHSR-202ENST00000427970 912 ntBASIC16.17■□□□□ 0.18
BEST1O76090 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.17■□□□□ 0.18
BEST1O76090 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.17■□□□□ 0.18
BEST1O76090 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.17■□□□□ 0.18
BEST1O76090 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.17■□□□□ 0.18
BEST1O76090 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
BEST1O76090 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST1O76090 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST1O76090 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.17■□□□□ 0.18
BEST1O76090 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST1O76090 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.17■□□□□ 0.18
BEST1O76090 RAB43P1-201ENST00000561790 589 ntBASIC16.17■□□□□ 0.18
BEST1O76090 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.17■□□□□ 0.18
BEST1O76090 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.17■□□□□ 0.18
BEST1O76090 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
BEST1O76090 LINC00554-201ENST00000564841 3011 ntBASIC16.17■□□□□ 0.18
BEST1O76090 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.17■□□□□ 0.18
BEST1O76090 REXO1L5P-201ENST00000622260 2098 ntBASIC16.17■□□□□ 0.18
BEST1O76090 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
BEST1O76090 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
BEST1O76090 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
BEST1O76090 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
BEST1O76090 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
BEST1O76090 AC126365.1-201ENST00000578585 1514 ntBASIC16.16■□□□□ 0.18
BEST1O76090 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.16■□□□□ 0.18
BEST1O76090 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
BEST1O76090 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.16■□□□□ 0.18
BEST1O76090 MIR1909-201ENST00000411312 80 ntBASIC16.16■□□□□ 0.18
BEST1O76090 GPR53P-205ENST00000457298 1084 ntBASIC16.16■□□□□ 0.18
BEST1O76090 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.16■□□□□ 0.18
BEST1O76090 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.16■□□□□ 0.18
BEST1O76090 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
BEST1O76090 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.16■□□□□ 0.18
BEST1O76090 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.16■□□□□ 0.18
BEST1O76090 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.16■□□□□ 0.18
BEST1O76090 AL022328.1-201ENST00000610050 478 ntBASIC16.16■□□□□ 0.18
BEST1O76090 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
BEST1O76090 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.16■□□□□ 0.18
BEST1O76090 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
BEST1O76090 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.16■□□□□ 0.18
BEST1O76090 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.16■□□□□ 0.18
BEST1O76090 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST1O76090 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.15■□□□□ 0.18
BEST1O76090 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
BEST1O76090 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
BEST1O76090 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.15■□□□□ 0.18
BEST1O76090 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms