Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
ZNF253O75346 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF253O75346 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
ZNF253O75346 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF253O75346 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF253O75346 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF253O75346 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
ZNF253O75346 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.16□□□□□ -0.46
ZNF253O75346 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 AC002056.1-201ENST00000395613 760 ntBASIC12.16□□□□□ -0.46
ZNF253O75346 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF253O75346 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.16□□□□□ -0.46
ZNF253O75346 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.16□□□□□ -0.46
ZNF253O75346 KRT18P56-201ENST00000507275 550 ntBASIC12.16□□□□□ -0.46
ZNF253O75346 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 IGHV3-22-201ENST00000520721 359 ntBASIC12.16□□□□□ -0.46
ZNF253O75346 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.16□□□□□ -0.46
ZNF253O75346 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.16□□□□□ -0.46
ZNF253O75346 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF253O75346 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF253O75346 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
ZNF253O75346 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ZNF253O75346 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF253O75346 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF253O75346 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF253O75346 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF253O75346 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF253O75346 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.16□□□□□ -0.46
ZNF253O75346 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ZNF253O75346 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF253O75346 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF253O75346 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.15□□□□□ -0.46
ZNF253O75346 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF253O75346 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF253O75346 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
ZNF253O75346 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF253O75346 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.15□□□□□ -0.46
ZNF253O75346 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
ZNF253O75346 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF253O75346 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF253O75346 AL691432.1-201ENST00000596308 1422 ntBASIC12.15□□□□□ -0.46
ZNF253O75346 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ZNF253O75346 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 AC004987.2-201ENST00000395959 1148 ntBASIC12.15□□□□□ -0.46
ZNF253O75346 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.15□□□□□ -0.46
ZNF253O75346 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF253O75346 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF253O75346 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.15□□□□□ -0.46
ZNF253O75346 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.15□□□□□ -0.46
ZNF253O75346 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF253O75346 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.15□□□□□ -0.46
ZNF253O75346 RNA5SP415-201ENST00000517246 115 ntBASIC12.15□□□□□ -0.46
ZNF253O75346 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.15□□□□□ -0.46
ZNF253O75346 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.15□□□□□ -0.46
ZNF253O75346 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.15□□□□□ -0.46
ZNF253O75346 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.15□□□□□ -0.46
ZNF253O75346 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.15□□□□□ -0.46
ZNF253O75346 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
ZNF253O75346 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.15□□□□□ -0.46
ZNF253O75346 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
ZNF253O75346 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.15□□□□□ -0.46
ZNF253O75346 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 AC116407.3-201ENST00000623905 1129 ntBASIC12.15□□□□□ -0.46
ZNF253O75346 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ZNF253O75346 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
ZNF253O75346 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms