Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 MROH4P-201ENST00000431302 1578 ntBASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 AC104457.1-201ENST00000401024 814 ntBASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 HMGN1P19-201ENST00000436976 333 ntBASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 GAPDHP40-201ENST00000505218 1006 ntBASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 TERF1P3-201ENST00000505638 1227 ntBASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 AL049840.4-201ENST00000602422 811 ntBASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 WASH3P-207ENST00000560956 1394 ntBASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 AC026410.3-201ENST00000514280 936 ntBASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 BRI3BPP1-201ENST00000594224 787 ntBASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC196A0A1B0GTZ2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 DRD5P1-201ENST00000456605 1438 ntBASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC196A0A1B0GTZ2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms