Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 KRT18P34-201ENST00000488218 1270 ntBASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 SNHG9-202ENST00000564014 471 ntBASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 AC105339.1-204ENST00000636249 355 ntBASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 AC136759.1-202ENST00000530858 2194 ntBASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 AC027601.5-201ENST00000624065 2482 ntBASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 AL135744.1-201ENST00000565098 629 ntBASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 AL359183.1-201ENST00000623796 2132 ntBASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 BX640514.1-201ENST00000583223 1918 ntBASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 AL928921.2-201ENST00000641325 2442 ntBASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4B1Q9Y6B7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 CICP20-201ENST00000443330 2801 ntBASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4B1Q9Y6B7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms