Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAPPC4Q9Y296 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.12
TRAPPC4Q9Y296 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAPPC4Q9Y296 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
TRAPPC4Q9Y296 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAPPC4Q9Y296 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAPPC4Q9Y296 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 TREML5P-201ENST00000421694 576 ntBASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 AC092580.3-201ENST00000430932 139 ntBASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 ZNF890P-202ENST00000530367 1156 ntBASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 RFPL4AP1-201ENST00000530883 850 ntBASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 DUX4L27-201ENST00000554796 1261 ntBASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 MIR4313-201ENST00000580760 101 ntBASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 AC097359.3-201ENST00000603982 1210 ntBASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 AC105250.1-201ENST00000509378 2057 ntBASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAPPC4Q9Y296 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 AC241585.1-201ENST00000433527 519 ntBASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 RN7SL618P-201ENST00000477850 296 ntBASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 HNRNPUP1-201ENST00000554987 333 ntBASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 AL590560.3-201ENST00000623350 461 ntBASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 AC018892.3-201ENST00000623986 2499 ntBASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRAPPC4Q9Y296 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms