Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SATB2Q9UPW6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SATB2Q9UPW6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SATB2Q9UPW6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SATB2Q9UPW6 CTBP2P5-201ENST00000454986 1264 ntBASIC15.27■□□□□ 0.04
SATB2Q9UPW6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.27■□□□□ 0.04
SATB2Q9UPW6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.27■□□□□ 0.04
SATB2Q9UPW6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.27■□□□□ 0.04
SATB2Q9UPW6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SATB2Q9UPW6 AC036164.1-201ENST00000570544 333 ntBASIC15.27■□□□□ 0.04
SATB2Q9UPW6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.27■□□□□ 0.04
SATB2Q9UPW6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.27■□□□□ 0.04
SATB2Q9UPW6 MIR4321-201ENST00000592276 80 ntBASIC15.27■□□□□ 0.04
SATB2Q9UPW6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.27■□□□□ 0.04
SATB2Q9UPW6 LINC01115-203ENST00000606068 577 ntBASIC15.27■□□□□ 0.04
SATB2Q9UPW6 AL365330.1-201ENST00000607459 531 ntBASIC15.27■□□□□ 0.04
SATB2Q9UPW6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.27■□□□□ 0.04
SATB2Q9UPW6 RPSAP52-203ENST00000622976 1023 ntBASIC15.27■□□□□ 0.04
SATB2Q9UPW6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 OR2I1P-209ENST00000641730 5365 ntBASIC15.27■□□□□ 0.03
SATB2Q9UPW6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 AL592424.1-201ENST00000563624 1536 ntBASIC15.27■□□□□ 0.03
SATB2Q9UPW6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.27■□□□□ 0.03
SATB2Q9UPW6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 KRT8P22-201ENST00000562317 1415 ntBASIC15.26■□□□□ 0.03
SATB2Q9UPW6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 OR2I1P-210ENST00000642037 4691 ntBASIC15.26■□□□□ 0.03
SATB2Q9UPW6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 AL162726.2-201ENST00000438986 1017 ntBASIC15.26■□□□□ 0.03
SATB2Q9UPW6 KLF2P4-201ENST00000451959 1225 ntBASIC15.26■□□□□ 0.03
SATB2Q9UPW6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 SLC25A47P1-201ENST00000531577 414 ntBASIC15.26■□□□□ 0.03
SATB2Q9UPW6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.26■□□□□ 0.03
SATB2Q9UPW6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 CU634019.7-201ENST00000624153 1185 ntBASIC15.26■□□□□ 0.03
SATB2Q9UPW6 FP236241.2-201ENST00000624906 1185 ntBASIC15.26■□□□□ 0.03
SATB2Q9UPW6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 PDIA3P1-201ENST00000471856 1510 ntBASIC15.26■□□□□ 0.03
SATB2Q9UPW6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.26■□□□□ 0.03
SATB2Q9UPW6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 AC022188.1-201ENST00000620960 1664 ntBASIC15.25■□□□□ 0.03
SATB2Q9UPW6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SATB2Q9UPW6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms