Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 AC027307.3-201ENST00000594262 1100 ntBASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 WASH3P-207ENST00000560956 1394 ntBASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 AP000845.1-201ENST00000581677 2131 ntBASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 AC012508.2-201ENST00000567613 1472 ntBASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 LINC00554-201ENST00000564841 3011 ntBASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA4Q9UN74 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms