Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 AC012441.1-201ENST00000446669 685 ntBASIC14.24□□□□□ -0.13
LRFN1Q9P244 KLF2P4-201ENST00000451959 1225 ntBASIC14.24□□□□□ -0.13
LRFN1Q9P244 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 PDIA3P1-201ENST00000471856 1510 ntBASIC14.24□□□□□ -0.13
LRFN1Q9P244 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.24□□□□□ -0.13
LRFN1Q9P244 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRFN1Q9P244 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 PCDHA1-201ENST00000378133 2726 ntBASIC14.23□□□□□ -0.13
LRFN1Q9P244 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 ACKR1-201ENST00000368121 1240 ntBASIC14.23□□□□□ -0.13
LRFN1Q9P244 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 CTBP2P5-201ENST00000454986 1264 ntBASIC14.23□□□□□ -0.13
LRFN1Q9P244 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 MIR4259-201ENST00000584466 101 ntBASIC14.23□□□□□ -0.13
LRFN1Q9P244 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms