Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 AP000845.1-201ENST00000581677 2131 ntBASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 AC025048.6-201ENST00000634326 1161 ntBASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 AC012508.2-201ENST00000567613 1472 ntBASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 SOCS2P1-201ENST00000417727 557 ntBASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 WASH3P-207ENST00000560956 1394 ntBASIC18.8■□□□□ 0.6
ECHDC1Q9NTX5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms