Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PDLIM7Q9NR12 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AP001505.2-201ENST00000616815 443 ntBASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AL354989.2-201ENST00000435838 1540 ntBASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AC092978.1-202ENST00000637590 1327 ntBASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM7Q9NR12 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 FTLP10-202ENST00000505798 471 ntBASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 AC138649.2-201ENST00000615886 705 ntBASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 MIR7845-201ENST00000618396 99 ntBASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 AL023775.1-201ENST00000454907 1746 ntBASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.13■□□□□ 0.33
PDLIM7Q9NR12 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms