Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 MROH4P-201ENST00000431302 1578 ntBASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 AC010336.2-201ENST00000564226 506 ntBASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 MIR4745-201ENST00000577608 62 ntBASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 AL359258.3-201ENST00000622910 2331 ntBASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 TUBB3P1-201ENST00000405796 1332 ntBASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 AC005034.1-201ENST00000426657 489 ntBASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 RPL13P2-201ENST00000440687 659 ntBASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 SERBP1P3-201ENST00000459980 809 ntBASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 HLA-V-204ENST00000476601 1289 ntBASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 AC093512.1-201ENST00000617969 520 ntBASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 ZBED1P1-201ENST00000502364 1930 ntBASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
UPF3BQ9BZI7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 AC023908.3-201ENST00000564211 3047 ntBASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPF3BQ9BZI7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
UPF3BQ9BZI7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPF3BQ9BZI7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF3BQ9BZI7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPF3BQ9BZI7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPF3BQ9BZI7 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.51■□□□□ 0.55
UPF3BQ9BZI7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPF3BQ9BZI7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UPF3BQ9BZI7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF3BQ9BZI7 AC013726.1-201ENST00000563747 2285 ntBASIC18.51■□□□□ 0.55
UPF3BQ9BZI7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.51■□□□□ 0.55
UPF3BQ9BZI7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms