Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 C1R-201ENST00000535233 2211 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AP001267.2-201ENST00000532619 2086 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 OR51A6P-201ENST00000418680 1004 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 OR2X1P-201ENST00000421144 687 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC137794.1-201ENST00000509185 914 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC079776.4-201ENST00000511039 504 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 RN7SKP157-201ENST00000516174 282 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 RNU6-467P-201ENST00000517027 110 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC026407.1-201ENST00000518369 204 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 MTND1P6-201ENST00000523621 946 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC109466.1-203ENST00000524297 1083 ntTSL 3 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC027307.2-201ENST00000591252 911 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC010487.2-201ENST00000594546 486 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AL773604.1-201ENST00000617417 272 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 FO681491.1-202ENST00000623392 737 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AL928921.2-201ENST00000641325 2442 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC084364.1-201ENST00000551967 1556 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC018529.2-202ENST00000611482 3087 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 HSPA7-201ENST00000445535 1927 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 AC092964.1-201ENST00000623304 1399 ntBASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP3-1Q9BYR8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms