Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 AC092978.1-202ENST00000637590 1327 ntBASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 AC007274.2-201ENST00000421675 662 ntBASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 AC104073.2-201ENST00000453737 312 ntBASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTFDC1Q9BY42 AC004899.1-201ENST00000424687 1714 ntBASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 IGF1-203ENST00000392904 761 ntTSL 5 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 EEF1DP6-201ENST00000449232 372 ntBASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 AC012618.1-201ENST00000461223 412 ntBASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 AC009955.4-201ENST00000597192 544 ntBASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 AL358472.3-201ENST00000608147 415 ntBASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 AL805961.1-203ENST00000641078 1258 ntBASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTFDC1Q9BY42 AC127383.1-201ENST00000444697 1800 ntBASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms