Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA3Q99758 AL512306.1-201ENST00000432698 848 ntBASIC19.96■□□□□ 0.79
ABCA3Q99758 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19.96■□□□□ 0.79
ABCA3Q99758 BUD31-205ENST00000456893 512 ntTSL 5 BASIC19.96■□□□□ 0.79
ABCA3Q99758 LINC00634-202ENST00000505157 222 ntBASIC19.96■□□□□ 0.79
ABCA3Q99758 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.96■□□□□ 0.79
ABCA3Q99758 AC093752.3-201ENST00000567343 901 ntBASIC19.96■□□□□ 0.79
ABCA3Q99758 FO393412.1-201ENST00000619841 382 ntBASIC19.96■□□□□ 0.79
ABCA3Q99758 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCA3Q99758 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCA3Q99758 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCA3Q99758 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.95■□□□□ 0.78
ABCA3Q99758 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCA3Q99758 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCA3Q99758 AC092364.2-201ENST00000596710 2692 ntBASIC19.95■□□□□ 0.78
ABCA3Q99758 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCA3Q99758 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCA3Q99758 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCA3Q99758 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC19.95■□□□□ 0.78
ABCA3Q99758 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCA3Q99758 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC19.95■□□□□ 0.78
ABCA3Q99758 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC19.95■□□□□ 0.78
ABCA3Q99758 AC244250.3-201ENST00000620749 366 ntBASIC19.95■□□□□ 0.78
ABCA3Q99758 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.95■□□□□ 0.78
ABCA3Q99758 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCA3Q99758 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCA3Q99758 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCA3Q99758 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCA3Q99758 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ABCA3Q99758 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCA3Q99758 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.94■□□□□ 0.78
ABCA3Q99758 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC19.94■□□□□ 0.78
ABCA3Q99758 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.94■□□□□ 0.78
ABCA3Q99758 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC19.94■□□□□ 0.78
ABCA3Q99758 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.94■□□□□ 0.78
ABCA3Q99758 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC19.94■□□□□ 0.78
ABCA3Q99758 DNM1P51-201ENST00000558149 522 ntBASIC19.94■□□□□ 0.78
ABCA3Q99758 EIF5AP2-201ENST00000585668 1047 ntBASIC19.94■□□□□ 0.78
ABCA3Q99758 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.94■□□□□ 0.78
ABCA3Q99758 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ABCA3Q99758 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
ABCA3Q99758 ZBED1P1-201ENST00000502364 1930 ntBASIC19.94■□□□□ 0.78
ABCA3Q99758 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ABCA3Q99758 AC024909.3-201ENST00000611513 2257 ntBASIC19.94■□□□□ 0.78
ABCA3Q99758 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC19.94■□□□□ 0.78
ABCA3Q99758 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
ABCA3Q99758 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA3Q99758 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA3Q99758 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA3Q99758 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.93■□□□□ 0.78
ABCA3Q99758 STK16-203ENST00000409516 895 ntTSL 2 BASIC19.93■□□□□ 0.78
ABCA3Q99758 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC19.93■□□□□ 0.78
ABCA3Q99758 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC19.93■□□□□ 0.78
ABCA3Q99758 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC19.93■□□□□ 0.78
ABCA3Q99758 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC19.93■□□□□ 0.78
ABCA3Q99758 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC19.93■□□□□ 0.78
ABCA3Q99758 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA3Q99758 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ABCA3Q99758 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ABCA3Q99758 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.93■□□□□ 0.78
ABCA3Q99758 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA3Q99758 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA3Q99758 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ABCA3Q99758 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA3Q99758 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA3Q99758 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC19.93■□□□□ 0.78
ABCA3Q99758 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC19.93■□□□□ 0.78
ABCA3Q99758 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.93■□□□□ 0.78
ABCA3Q99758 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.93■□□□□ 0.78
ABCA3Q99758 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA3Q99758 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC19.93■□□□□ 0.78
ABCA3Q99758 RN7SL396P-201ENST00000471086 295 ntBASIC19.93■□□□□ 0.78
ABCA3Q99758 ALG1L6P-201ENST00000515248 758 ntBASIC19.93■□□□□ 0.78
ABCA3Q99758 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC19.93■□□□□ 0.78
ABCA3Q99758 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC19.93■□□□□ 0.78
ABCA3Q99758 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC19.93■□□□□ 0.78
ABCA3Q99758 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.93■□□□□ 0.78
ABCA3Q99758 LINC01783-202ENST00000614408 828 ntBASIC19.93■□□□□ 0.78
ABCA3Q99758 BX284668.2-205ENST00000619677 828 ntBASIC19.93■□□□□ 0.78
ABCA3Q99758 LINC01815-202ENST00000641468 1409 ntBASIC19.93■□□□□ 0.78
ABCA3Q99758 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.93■□□□□ 0.78
ABCA3Q99758 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA3Q99758 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC19.92■□□□□ 0.78
ABCA3Q99758 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.92■□□□□ 0.78
ABCA3Q99758 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.92■□□□□ 0.78
ABCA3Q99758 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms