Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 CLK3P2-201ENST00000427566 1453 ntBASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 AC004066.1-201ENST00000502488 802 ntBASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PDLIM5Q96HC4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 MEP1AP4-201ENST00000423244 1087 ntBASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 AC092183.1-201ENST00000469884 875 ntBASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 RFPL4AP1-201ENST00000530883 850 ntBASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 RRP7BP-205ENST00000566851 833 ntBASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms