Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 AC023024.2-201ENST00000623561 1993 ntBASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AC084364.1-201ENST00000551967 1556 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AC091951.1-201ENST00000512854 2465 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AC107890.1-201ENST00000422478 521 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 FAM86GP-201ENST00000448322 971 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AC067863.1-201ENST00000494933 530 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AC025048.3-201ENST00000590609 569 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 TEX28P1-201ENST00000613479 1221 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AL138828.2-201ENST00000615812 383 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 TEX28P2-201ENST00000617764 1221 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AC005702.4-201ENST00000618393 416 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 TCAF2P1-201ENST00000291129 2421 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 AC068418.2-201ENST00000577309 3703 ntBASIC16.21■□□□□ 0.19
TRAF3IP1Q8TDR0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.21■□□□□ 0.18
TRAF3IP1Q8TDR0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.21■□□□□ 0.18
TRAF3IP1Q8TDR0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAF3IP1Q8TDR0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAF3IP1Q8TDR0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAF3IP1Q8TDR0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAF3IP1Q8TDR0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAF3IP1Q8TDR0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAF3IP1Q8TDR0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAF3IP1Q8TDR0 TNRC18P2-201ENST00000417666 2714 ntBASIC16.2■□□□□ 0.18
TRAF3IP1Q8TDR0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAF3IP1Q8TDR0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAF3IP1Q8TDR0 Z97205.2-201ENST00000564697 1639 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms