Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 FES-204ENST00000414248 2327 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 RN7SKP175-201ENST00000408472 289 ntBASIC23.84■■□□□ 1.41
VPS8Q8N3P4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 ACE3P-201ENST00000423435 1973 ntBASIC23.84■■□□□ 1.41
VPS8Q8N3P4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 ZBED1P1-201ENST00000502364 1930 ntBASIC23.84■■□□□ 1.41
VPS8Q8N3P4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 FAM21FP-201ENST00000426241 1131 ntBASIC23.84■■□□□ 1.41
VPS8Q8N3P4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
VPS8Q8N3P4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS8Q8N3P4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC23.83■■□□□ 1.41
VPS8Q8N3P4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
VPS8Q8N3P4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
VPS8Q8N3P4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS8Q8N3P4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS8Q8N3P4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
VPS8Q8N3P4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
VPS8Q8N3P4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC23.83■■□□□ 1.41
VPS8Q8N3P4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS8Q8N3P4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC23.83■■□□□ 1.41
VPS8Q8N3P4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 AP006547.1-201ENST00000563435 692 ntBASIC23.83■■□□□ 1.4
VPS8Q8N3P4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 RN7SL713P-201ENST00000582127 302 ntBASIC23.83■■□□□ 1.4
VPS8Q8N3P4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 OR10B1P-201ENST00000601666 907 ntBASIC23.83■■□□□ 1.4
VPS8Q8N3P4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
VPS8Q8N3P4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 AP000593.2-201ENST00000542775 1433 ntBASIC23.82■■□□□ 1.4
VPS8Q8N3P4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms