Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 AC007326.2-201ENST00000624224 7579 ntBASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 CES1P1-201ENST00000421606 1704 ntBASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AC073439.1-201ENST00000624121 1774 ntBASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AC093724.1-201ENST00000448659 1027 ntBASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AC105233.2-201ENST00000523697 349 ntBASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AF228730.5-201ENST00000530288 346 ntBASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AC027307.2-201ENST00000591252 911 ntBASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AC008267.7-201ENST00000624570 1194 ntBASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TMEM53Q6P2H8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.33□□□□□ -0.11
TMEM53Q6P2H8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM53Q6P2H8 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.33□□□□□ -0.11
TMEM53Q6P2H8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM53Q6P2H8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM53Q6P2H8 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM53Q6P2H8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM53Q6P2H8 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
TMEM53Q6P2H8 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM53Q6P2H8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.11
TMEM53Q6P2H8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.33□□□□□ -0.11
TMEM53Q6P2H8 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM53Q6P2H8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 AL596087.1-201ENST00000400979 1969 ntBASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM53Q6P2H8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms