Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.76□□□□□ -0.21
NKX6-1P78426 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.76□□□□□ -0.21
NKX6-1P78426 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.76□□□□□ -0.21
NKX6-1P78426 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
NKX6-1P78426 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.76□□□□□ -0.21
NKX6-1P78426 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-1P78426 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.76□□□□□ -0.21
NKX6-1P78426 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.76□□□□□ -0.21
NKX6-1P78426 FAM86MP-201ENST00000340703 885 ntBASIC13.76□□□□□ -0.21
NKX6-1P78426 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.76□□□□□ -0.21
NKX6-1P78426 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.76□□□□□ -0.21
NKX6-1P78426 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.76□□□□□ -0.21
NKX6-1P78426 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.76□□□□□ -0.21
NKX6-1P78426 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.76□□□□□ -0.21
NKX6-1P78426 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
NKX6-1P78426 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
NKX6-1P78426 CTBP2P3-201ENST00000585629 1255 ntBASIC13.76□□□□□ -0.21
NKX6-1P78426 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.76□□□□□ -0.21
NKX6-1P78426 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.76□□□□□ -0.21
NKX6-1P78426 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.76□□□□□ -0.21
NKX6-1P78426 AC004461.2-201ENST00000629517 803 ntBASIC13.76□□□□□ -0.21
NKX6-1P78426 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-1P78426 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.76□□□□□ -0.21
NKX6-1P78426 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NKX6-1P78426 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-1P78426 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 AC134407.2-201ENST00000625089 1978 ntBASIC13.76□□□□□ -0.21
NKX6-1P78426 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-1P78426 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
NKX6-1P78426 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.76□□□□□ -0.21
NKX6-1P78426 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.76□□□□□ -0.21
NKX6-1P78426 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NKX6-1P78426 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.75□□□□□ -0.21
NKX6-1P78426 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
NKX6-1P78426 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.75□□□□□ -0.21
NKX6-1P78426 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
NKX6-1P78426 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.75□□□□□ -0.21
NKX6-1P78426 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
NKX6-1P78426 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NKX6-1P78426 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.75□□□□□ -0.21
NKX6-1P78426 AZGP1P1-201ENST00000411909 902 ntBASIC13.75□□□□□ -0.21
NKX6-1P78426 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.75□□□□□ -0.21
NKX6-1P78426 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.75□□□□□ -0.21
NKX6-1P78426 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 ELK1P1-201ENST00000485699 580 ntBASIC13.75□□□□□ -0.21
NKX6-1P78426 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.75□□□□□ -0.21
NKX6-1P78426 AC023310.3-201ENST00000557027 670 ntBASIC13.75□□□□□ -0.21
NKX6-1P78426 AC100756.1-201ENST00000562736 682 ntBASIC13.75□□□□□ -0.21
NKX6-1P78426 AC138749.3-201ENST00000567691 622 ntBASIC13.75□□□□□ -0.21
NKX6-1P78426 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 AC025048.3-201ENST00000590609 569 ntBASIC13.75□□□□□ -0.21
NKX6-1P78426 AC116165.1-201ENST00000611806 668 ntBASIC13.75□□□□□ -0.21
NKX6-1P78426 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms