Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
CDC42P60953 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CDC42P60953 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.24□□□□□ -0.13
CDC42P60953 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.24□□□□□ -0.13
CDC42P60953 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.24□□□□□ -0.13
CDC42P60953 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 BX640514.1-201ENST00000583223 1918 ntBASIC14.24□□□□□ -0.13
CDC42P60953 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
CDC42P60953 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CDC42P60953 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.24□□□□□ -0.13
CDC42P60953 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 AC011467.4-201ENST00000594891 528 ntBASIC14.24□□□□□ -0.13
CDC42P60953 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.24□□□□□ -0.13
CDC42P60953 FAM215A-202ENST00000632077 792 ntBASIC14.24□□□□□ -0.13
CDC42P60953 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CDC42P60953 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CDC42P60953 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.24□□□□□ -0.13
CDC42P60953 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42P60953 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDC42P60953 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.23□□□□□ -0.13
CDC42P60953 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.23□□□□□ -0.13
CDC42P60953 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 CYP4F24P-201ENST00000586049 1580 ntBASIC14.23□□□□□ -0.13
CDC42P60953 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 REXO1L2P-201ENST00000425429 2069 ntBASIC14.23□□□□□ -0.13
CDC42P60953 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CDC42P60953 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.23□□□□□ -0.13
CDC42P60953 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.23□□□□□ -0.13
CDC42P60953 EEF1DP4-201ENST00000446006 880 ntBASIC14.23□□□□□ -0.13
CDC42P60953 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.23□□□□□ -0.13
CDC42P60953 AL139010.1-201ENST00000454878 894 ntBASIC14.23□□□□□ -0.13
CDC42P60953 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDC42P60953 RNA5SP410-201ENST00000516285 106 ntBASIC14.23□□□□□ -0.13
CDC42P60953 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDC42P60953 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.23□□□□□ -0.13
CDC42P60953 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.23□□□□□ -0.13
CDC42P60953 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.23□□□□□ -0.13
CDC42P60953 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.23□□□□□ -0.13
CDC42P60953 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.23□□□□□ -0.13
CDC42P60953 AL031008.1-201ENST00000619963 541 ntBASIC14.23□□□□□ -0.13
CDC42P60953 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.23□□□□□ -0.13
CDC42P60953 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 AC005840.4-201ENST00000541242 2494 ntBASIC14.23□□□□□ -0.13
CDC42P60953 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.23□□□□□ -0.13
CDC42P60953 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDC42P60953 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
CDC42P60953 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.23□□□□□ -0.13
CDC42P60953 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDC42P60953 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.23□□□□□ -0.13
CDC42P60953 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42P60953 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
CDC42P60953 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC42P60953 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms