Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 IQSEC3P1-201ENST00000538799 536 ntBASIC16.03■□□□□ 0.16
PTPN5P54829 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.03■□□□□ 0.16
PTPN5P54829 MIR3907-201ENST00000579424 151 ntBASIC16.03■□□□□ 0.16
PTPN5P54829 CLUHP6-201ENST00000580789 941 ntBASIC16.03■□□□□ 0.16
PTPN5P54829 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.03■□□□□ 0.16
PTPN5P54829 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTPN5P54829 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.03■□□□□ 0.16
PTPN5P54829 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.03■□□□□ 0.16
PTPN5P54829 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN5P54829 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.03■□□□□ 0.16
PTPN5P54829 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN5P54829 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN5P54829 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN5P54829 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN5P54829 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN5P54829 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN5P54829 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN5P54829 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN5P54829 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN5P54829 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PTPN5P54829 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PTPN5P54829 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PTPN5P54829 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN5P54829 AC022188.1-201ENST00000620960 1664 ntBASIC16.02■□□□□ 0.16
PTPN5P54829 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN5P54829 AC046158.3-201ENST00000624947 2558 ntBASIC16.02■□□□□ 0.16
PTPN5P54829 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN5P54829 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PTPN5P54829 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN5P54829 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN5P54829 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC16.02■□□□□ 0.16
PTPN5P54829 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.02■□□□□ 0.16
PTPN5P54829 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN5P54829 PGAM1P5-201ENST00000548011 764 ntBASIC16.02■□□□□ 0.16
PTPN5P54829 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN5P54829 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PTPN5P54829 AP001505.2-201ENST00000616815 443 ntBASIC16.02■□□□□ 0.16
PTPN5P54829 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.02■□□□□ 0.16
PTPN5P54829 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN5P54829 CASP16P-204ENST00000635032 809 ntBASIC16.02■□□□□ 0.16
PTPN5P54829 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.02■□□□□ 0.15
PTPN5P54829 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN5P54829 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN5P54829 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN5P54829 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN5P54829 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PTPN5P54829 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PTPN5P54829 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN5P54829 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN5P54829 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN5P54829 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN5P54829 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PTPN5P54829 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN5P54829 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN5P54829 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PTPN5P54829 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN5P54829 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN5P54829 CYP4F24P-201ENST00000586049 1580 ntBASIC16.01■□□□□ 0.15
PTPN5P54829 AC006480.2-201ENST00000609770 1337 ntBASIC16.01■□□□□ 0.15
PTPN5P54829 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 AC024909.3-201ENST00000611513 2257 ntBASIC16.01■□□□□ 0.15
PTPN5P54829 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PTPN5P54829 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN5P54829 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN5P54829 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN5P54829 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PTPN5P54829 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN5P54829 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN5P54829 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PTPN5P54829 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.01■□□□□ 0.15
PTPN5P54829 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN5P54829 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms