Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.45■□□□□ 0.38
USP11P51784 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 MIR5189-201ENST00000577370 114 ntBASIC17.45■□□□□ 0.38
USP11P51784 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.45■□□□□ 0.38
USP11P51784 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.45■□□□□ 0.38
USP11P51784 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
USP11P51784 AL035252.4-201ENST00000624174 288 ntBASIC17.45■□□□□ 0.38
USP11P51784 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.45■□□□□ 0.38
USP11P51784 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
USP11P51784 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.45■□□□□ 0.38
USP11P51784 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.45■□□□□ 0.38
USP11P51784 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.45■□□□□ 0.38
USP11P51784 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 MROH4P-201ENST00000431302 1578 ntBASIC17.45■□□□□ 0.38
USP11P51784 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
USP11P51784 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 AC012508.2-201ENST00000567613 1472 ntBASIC17.44■□□□□ 0.38
USP11P51784 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
USP11P51784 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 AL109954.1-202ENST00000564051 2148 ntBASIC17.44■□□□□ 0.38
USP11P51784 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.44■□□□□ 0.38
USP11P51784 AL158070.2-201ENST00000623713 1621 ntBASIC17.44■□□□□ 0.38
USP11P51784 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
USP11P51784 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
USP11P51784 BAATP1-201ENST00000412284 1225 ntBASIC17.44■□□□□ 0.38
USP11P51784 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.44■□□□□ 0.38
USP11P51784 TTTY23B-201ENST00000442790 549 ntBASIC17.44■□□□□ 0.38
USP11P51784 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.44■□□□□ 0.38
USP11P51784 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.44■□□□□ 0.38
USP11P51784 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
USP11P51784 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.44■□□□□ 0.38
USP11P51784 PTP4A1P2-201ENST00000546033 454 ntBASIC17.44■□□□□ 0.38
USP11P51784 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
USP11P51784 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.44■□□□□ 0.38
USP11P51784 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.44■□□□□ 0.38
USP11P51784 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
USP11P51784 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.44■□□□□ 0.38
USP11P51784 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 AC023024.2-201ENST00000623561 1993 ntBASIC17.44■□□□□ 0.38
USP11P51784 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.44■□□□□ 0.38
USP11P51784 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.44■□□□□ 0.38
USP11P51784 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
USP11P51784 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
USP11P51784 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.44■□□□□ 0.38
USP11P51784 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP11P51784 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.43■□□□□ 0.38
USP11P51784 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
USP11P51784 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 AC073347.1-201ENST00000421633 2643 ntBASIC17.43■□□□□ 0.38
USP11P51784 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.43■□□□□ 0.38
USP11P51784 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
USP11P51784 AC013268.4-201ENST00000637413 2228 ntBASIC17.43■□□□□ 0.38
USP11P51784 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
USP11P51784 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
USP11P51784 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
USP11P51784 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.43■□□□□ 0.38
USP11P51784 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms