Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP13P45452 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
MMP13P45452 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.16■□□□□ 0.18
MMP13P45452 AC136604.1-201ENST00000418535 575 ntBASIC16.16■□□□□ 0.18
MMP13P45452 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MMP13P45452 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.16■□□□□ 0.18
MMP13P45452 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP13P45452 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP13P45452 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.16■□□□□ 0.18
MMP13P45452 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
MMP13P45452 AC097359.3-201ENST00000603982 1210 ntBASIC16.16■□□□□ 0.18
MMP13P45452 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
MMP13P45452 AL590560.3-201ENST00000623350 461 ntBASIC16.16■□□□□ 0.18
MMP13P45452 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
MMP13P45452 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP13P45452 AC087499.5-201ENST00000452760 1342 ntBASIC16.16■□□□□ 0.18
MMP13P45452 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
MMP13P45452 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP13P45452 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.16■□□□□ 0.18
MMP13P45452 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.15■□□□□ 0.18
MMP13P45452 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MMP13P45452 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MMP13P45452 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
MMP13P45452 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.15■□□□□ 0.18
MMP13P45452 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MMP13P45452 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.15■□□□□ 0.18
MMP13P45452 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.15■□□□□ 0.18
MMP13P45452 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.15■□□□□ 0.18
MMP13P45452 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.15■□□□□ 0.18
MMP13P45452 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.15■□□□□ 0.18
MMP13P45452 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.15■□□□□ 0.18
MMP13P45452 AC010336.2-201ENST00000564226 506 ntBASIC16.15■□□□□ 0.18
MMP13P45452 AC027796.2-201ENST00000575326 344 ntBASIC16.15■□□□□ 0.18
MMP13P45452 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.15■□□□□ 0.18
MMP13P45452 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
MMP13P45452 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.15■□□□□ 0.18
MMP13P45452 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MMP13P45452 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.15■□□□□ 0.18
MMP13P45452 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.15■□□□□ 0.18
MMP13P45452 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.15■□□□□ 0.18
MMP13P45452 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
MMP13P45452 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.15■□□□□ 0.18
MMP13P45452 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP13P45452 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
MMP13P45452 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
MMP13P45452 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
MMP13P45452 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
MMP13P45452 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MMP13P45452 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP13P45452 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.14■□□□□ 0.17
MMP13P45452 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MMP13P45452 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.14■□□□□ 0.17
MMP13P45452 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.14■□□□□ 0.17
MMP13P45452 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP13P45452 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP13P45452 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
MMP13P45452 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.14■□□□□ 0.17
MMP13P45452 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.14■□□□□ 0.17
MMP13P45452 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.14■□□□□ 0.17
MMP13P45452 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.14■□□□□ 0.17
MMP13P45452 AL390955.2-201ENST00000603032 514 ntBASIC16.14■□□□□ 0.17
MMP13P45452 AL844908.2-201ENST00000609461 460 ntBASIC16.14■□□□□ 0.17
MMP13P45452 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms