Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
MTHFRP42898 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MTHFRP42898 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MTHFRP42898 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.19■□□□□ 0.18
MTHFRP42898 AC114812.1-204ENST00000449669 728 ntBASIC16.19■□□□□ 0.18
MTHFRP42898 EIF4HP1-201ENST00000453115 687 ntBASIC16.19■□□□□ 0.18
MTHFRP42898 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
MTHFRP42898 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MTHFRP42898 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 AC126915.1-201ENST00000522847 1038 ntBASIC16.19■□□□□ 0.18
MTHFRP42898 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MTHFRP42898 MIR3619-201ENST00000579667 83 ntBASIC16.19■□□□□ 0.18
MTHFRP42898 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.19■□□□□ 0.18
MTHFRP42898 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.19■□□□□ 0.18
MTHFRP42898 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.19■□□□□ 0.18
MTHFRP42898 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.19■□□□□ 0.18
MTHFRP42898 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
MTHFRP42898 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 AC132872.4-202ENST00000622924 2756 ntBASIC16.19■□□□□ 0.18
MTHFRP42898 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.19■□□□□ 0.18
MTHFRP42898 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
MTHFRP42898 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.19■□□□□ 0.18
MTHFRP42898 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.19■□□□□ 0.18
MTHFRP42898 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 AL596257.1-201ENST00000641463 2694 ntBASIC16.18■□□□□ 0.18
MTHFRP42898 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MTHFRP42898 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MTHFRP42898 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MTHFRP42898 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.18■□□□□ 0.18
MTHFRP42898 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.18■□□□□ 0.18
MTHFRP42898 CNN2P10-201ENST00000443067 918 ntBASIC16.18■□□□□ 0.18
MTHFRP42898 RN7SL769P-201ENST00000469386 295 ntBASIC16.18■□□□□ 0.18
MTHFRP42898 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
MTHFRP42898 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.18■□□□□ 0.18
MTHFRP42898 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.18■□□□□ 0.18
MTHFRP42898 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.18■□□□□ 0.18
MTHFRP42898 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.18■□□□□ 0.18
MTHFRP42898 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.18■□□□□ 0.18
MTHFRP42898 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.18■□□□□ 0.18
MTHFRP42898 AC138627.1-207ENST00000641560 1006 ntBASIC16.18■□□□□ 0.18
MTHFRP42898 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
MTHFRP42898 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.18■□□□□ 0.18
MTHFRP42898 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 AC007950.2-201ENST00000615045 2347 ntBASIC16.18■□□□□ 0.18
MTHFRP42898 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MTHFRP42898 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MTHFRP42898 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFRP42898 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.17■□□□□ 0.18
MTHFRP42898 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.17■□□□□ 0.18
MTHFRP42898 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.17■□□□□ 0.18
MTHFRP42898 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
MTHFRP42898 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.17■□□□□ 0.18
MTHFRP42898 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.17■□□□□ 0.18
MTHFRP42898 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MTHFRP42898 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.17■□□□□ 0.18
MTHFRP42898 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.17■□□□□ 0.18
MTHFRP42898 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.17■□□□□ 0.18
MTHFRP42898 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.17■□□□□ 0.18
MTHFRP42898 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.17■□□□□ 0.18
MTHFRP42898 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.17■□□□□ 0.18
MTHFRP42898 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.17■□□□□ 0.18
MTHFRP42898 ECM1P1-201ENST00000604092 1279 ntBASIC16.17■□□□□ 0.18
MTHFRP42898 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.17■□□□□ 0.18
MTHFRP42898 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
MTHFRP42898 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms