Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
APOBEC1P41238 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
APOBEC1P41238 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.03□□□□□ -0.16
APOBEC1P41238 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
APOBEC1P41238 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.03□□□□□ -0.16
APOBEC1P41238 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
APOBEC1P41238 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
APOBEC1P41238 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
APOBEC1P41238 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
APOBEC1P41238 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
APOBEC1P41238 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOBEC1P41238 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
APOBEC1P41238 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.02□□□□□ -0.16
APOBEC1P41238 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.02□□□□□ -0.16
APOBEC1P41238 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOBEC1P41238 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOBEC1P41238 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOBEC1P41238 AC023024.2-201ENST00000623561 1993 ntBASIC14.02□□□□□ -0.16
APOBEC1P41238 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOBEC1P41238 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOBEC1P41238 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOBEC1P41238 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
APOBEC1P41238 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.02□□□□□ -0.17
APOBEC1P41238 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
APOBEC1P41238 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOBEC1P41238 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOBEC1P41238 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOBEC1P41238 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
APOBEC1P41238 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.02□□□□□ -0.17
APOBEC1P41238 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
APOBEC1P41238 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOBEC1P41238 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.02□□□□□ -0.17
APOBEC1P41238 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.02□□□□□ -0.17
APOBEC1P41238 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.02□□□□□ -0.17
APOBEC1P41238 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.02□□□□□ -0.17
APOBEC1P41238 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.02□□□□□ -0.17
APOBEC1P41238 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.02□□□□□ -0.17
APOBEC1P41238 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.02□□□□□ -0.17
APOBEC1P41238 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.02□□□□□ -0.17
APOBEC1P41238 AC004790.1-201ENST00000612686 536 ntBASIC14.02□□□□□ -0.17
APOBEC1P41238 AC008761.3-201ENST00000624803 892 ntBASIC14.02□□□□□ -0.17
APOBEC1P41238 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.02□□□□□ -0.17
APOBEC1P41238 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOBEC1P41238 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
APOBEC1P41238 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.02□□□□□ -0.17
APOBEC1P41238 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOBEC1P41238 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
APOBEC1P41238 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOBEC1P41238 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOBEC1P41238 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
APOBEC1P41238 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
APOBEC1P41238 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
APOBEC1P41238 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.01□□□□□ -0.17
APOBEC1P41238 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.01□□□□□ -0.17
APOBEC1P41238 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.01□□□□□ -0.17
APOBEC1P41238 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 AC007541.1-201ENST00000570282 1469 ntBASIC14.01□□□□□ -0.17
APOBEC1P41238 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
APOBEC1P41238 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.01□□□□□ -0.17
APOBEC1P41238 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
APOBEC1P41238 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
APOBEC1P41238 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 AL353779.1-201ENST00000434793 351 ntBASIC14.01□□□□□ -0.17
APOBEC1P41238 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.01□□□□□ -0.17
APOBEC1P41238 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.01□□□□□ -0.17
APOBEC1P41238 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.01□□□□□ -0.17
APOBEC1P41238 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.01□□□□□ -0.17
APOBEC1P41238 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.01□□□□□ -0.17
APOBEC1P41238 MIR4745-201ENST00000577608 62 ntBASIC14.01□□□□□ -0.17
APOBEC1P41238 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.01□□□□□ -0.17
APOBEC1P41238 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.01□□□□□ -0.17
APOBEC1P41238 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.01□□□□□ -0.17
APOBEC1P41238 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 PCDHA3-202ENST00000532566 4594 ntBASIC14.01□□□□□ -0.17
APOBEC1P41238 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms