Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.74■□□□□ 0.11
RPA3P35244 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.74■□□□□ 0.11
RPA3P35244 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
RPA3P35244 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.74■□□□□ 0.11
RPA3P35244 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RPA3P35244 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.73■□□□□ 0.11
RPA3P35244 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.73■□□□□ 0.11
RPA3P35244 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RPA3P35244 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
RPA3P35244 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.73■□□□□ 0.11
RPA3P35244 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 FAM220BP-201ENST00000377689 816 ntBASIC15.73■□□□□ 0.11
RPA3P35244 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RPA3P35244 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.73■□□□□ 0.11
RPA3P35244 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.73■□□□□ 0.11
RPA3P35244 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.73■□□□□ 0.11
RPA3P35244 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.73■□□□□ 0.11
RPA3P35244 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.73■□□□□ 0.11
RPA3P35244 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RPA3P35244 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.73■□□□□ 0.11
RPA3P35244 AL450472.2-201ENST00000603663 1156 ntBASIC15.73■□□□□ 0.11
RPA3P35244 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.73■□□□□ 0.11
RPA3P35244 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.73■□□□□ 0.11
RPA3P35244 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 AP3S2-216ENST00000617003 1561 ntBASIC15.73■□□□□ 0.11
RPA3P35244 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 AL136982.4-201ENST00000437689 1740 ntBASIC15.73■□□□□ 0.11
RPA3P35244 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 PCDHA3-202ENST00000532566 4594 ntBASIC15.73■□□□□ 0.11
RPA3P35244 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.73■□□□□ 0.11
RPA3P35244 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.73■□□□□ 0.11
RPA3P35244 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.73■□□□□ 0.11
RPA3P35244 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPA3P35244 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RPA3P35244 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RPA3P35244 AC041040.2-201ENST00000622926 2899 ntBASIC15.72■□□□□ 0.11
RPA3P35244 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RPA3P35244 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RPA3P35244 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.72■□□□□ 0.11
RPA3P35244 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.72■□□□□ 0.11
RPA3P35244 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.72■□□□□ 0.11
RPA3P35244 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RPA3P35244 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.72■□□□□ 0.11
RPA3P35244 RARRES2P9-201ENST00000565168 469 ntBASIC15.72■□□□□ 0.11
RPA3P35244 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.72■□□□□ 0.11
RPA3P35244 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.72■□□□□ 0.11
RPA3P35244 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.72■□□□□ 0.11
RPA3P35244 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.72■□□□□ 0.11
RPA3P35244 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.72■□□□□ 0.11
RPA3P35244 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.72■□□□□ 0.11
RPA3P35244 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.72■□□□□ 0.11
RPA3P35244 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RPA3P35244 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RPA3P35244 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.72■□□□□ 0.11
RPA3P35244 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.72■□□□□ 0.11
RPA3P35244 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.72■□□□□ 0.11
RPA3P35244 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
RPA3P35244 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.72■□□□□ 0.11
RPA3P35244 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.72■□□□□ 0.11
RPA3P35244 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.72■□□□□ 0.11
RPA3P35244 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPA3P35244 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.72■□□□□ 0.11
RPA3P35244 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RPA3P35244 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPA3P35244 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPA3P35244 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RPA3P35244 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPA3P35244 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms