Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC21.33■■□□□ 1.01
CPS1P31327 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPS1P31327 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CPS1P31327 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CPS1P31327 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPS1P31327 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPS1P31327 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC21.33■■□□□ 1
CPS1P31327 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC21.33■■□□□ 1
CPS1P31327 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1
CPS1P31327 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC21.33■■□□□ 1
CPS1P31327 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CPS1P31327 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC21.33■■□□□ 1
CPS1P31327 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC21.33■■□□□ 1
CPS1P31327 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CPS1P31327 AC087392.5-201ENST00000612517 489 ntBASIC21.33■■□□□ 1
CPS1P31327 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CPS1P31327 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC21.33■■□□□ 1
CPS1P31327 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC21.33■■□□□ 1
CPS1P31327 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPS1P31327 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPS1P31327 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPS1P31327 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPS1P31327 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPS1P31327 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPS1P31327 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPS1P31327 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPS1P31327 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPS1P31327 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CPS1P31327 AC008723.1-201ENST00000506922 207 ntBASIC21.32■■□□□ 1
CPS1P31327 AC027237.1-201ENST00000560942 655 ntBASIC21.32■■□□□ 1
CPS1P31327 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CPS1P31327 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC21.32■■□□□ 1
CPS1P31327 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CPS1P31327 GCK-209ENST00000616242 2260 ntTSL 5 BASIC21.32■■□□□ 1
CPS1P31327 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPS1P31327 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC21.32■■□□□ 1
CPS1P31327 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC21.31■■□□□ 1
CPS1P31327 AC127383.1-201ENST00000444697 1800 ntBASIC21.31■■□□□ 1
CPS1P31327 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPS1P31327 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPS1P31327 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPS1P31327 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CPS1P31327 AL357373.1-201ENST00000394974 322 ntBASIC21.31■■□□□ 1
CPS1P31327 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC21.31■■□□□ 1
CPS1P31327 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC21.31■■□□□ 1
CPS1P31327 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPS1P31327 AREG-202ENST00000502307 956 ntTSL 5 BASIC21.31■■□□□ 1
CPS1P31327 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC21.31■■□□□ 1
CPS1P31327 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC21.31■■□□□ 1
CPS1P31327 NUDT4P2-201ENST00000578341 546 ntBASIC21.31■■□□□ 1
CPS1P31327 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC21.31■■□□□ 1
CPS1P31327 FTLP5-201ENST00000586853 534 ntBASIC21.31■■□□□ 1
CPS1P31327 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC21.31■■□□□ 1
CPS1P31327 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC21.31■■□□□ 1
CPS1P31327 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.31■■□□□ 1
CPS1P31327 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPS1P31327 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC21.31■■□□□ 1
CPS1P31327 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPS1P31327 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPS1P31327 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPS1P31327 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CPS1P31327 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CPS1P31327 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPS1P31327 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC21.31■■□□□ 1
CPS1P31327 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPS1P31327 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC21.3■■□□□ 1
CPS1P31327 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC21.3■■□□□ 1
CPS1P31327 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC21.3■■□□□ 1
CPS1P31327 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPS1P31327 AP000358.1-201ENST00000456260 156 ntBASIC21.3■■□□□ 1
CPS1P31327 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC21.3■■□□□ 1
CPS1P31327 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC21.3■■□□□ 1
CPS1P31327 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC21.3■■□□□ 1
CPS1P31327 MME-218ENST00000625667 363 ntTSL 5 BASIC21.3■■□□□ 1
CPS1P31327 LINC00431-202ENST00000636375 159 ntBASIC21.3■■□□□ 1
CPS1P31327 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CPS1P31327 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPS1P31327 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CPS1P31327 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CPS1P31327 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.3■■□□□ 1
CPS1P31327 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC21.3■■□□□ 1
CPS1P31327 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CPS1P31327 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC21.3■■□□□ 1
CPS1P31327 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CPS1P31327 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
CPS1P31327 MRPL37P1-201ENST00000592451 1337 ntBASIC21.3■■□□□ 1
CPS1P31327 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.29■■□□□ 1
CPS1P31327 COX20P1-201ENST00000366529 357 ntBASIC21.29■■□□□ 1
CPS1P31327 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPS1P31327 AL592076.1-201ENST00000424448 303 ntBASIC21.29■■□□□ 1
CPS1P31327 AL627422.1-201ENST00000434104 580 ntBASIC21.29■■□□□ 1
CPS1P31327 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPS1P31327 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CPS1P31327 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPS1P31327 AL157813.1-201ENST00000612996 587 ntBASIC21.29■■□□□ 1
CPS1P31327 AC099398.1-201ENST00000567919 2776 ntBASIC21.29■■□□□ 1
CPS1P31327 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CPS1P31327 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC21.29■■□□□ 1
CPS1P31327 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPS1P31327 FRMD6-AS1-201ENST00000617151 2229 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms