Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.06□□□□□ -0.16
FREM3P0C091 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
FREM3P0C091 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.06□□□□□ -0.16
FREM3P0C091 GPR53P-205ENST00000457298 1084 ntBASIC14.06□□□□□ -0.16
FREM3P0C091 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.06□□□□□ -0.16
FREM3P0C091 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.06□□□□□ -0.16
FREM3P0C091 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.06□□□□□ -0.16
FREM3P0C091 AL359711.2-201ENST00000563105 872 ntBASIC14.06□□□□□ -0.16
FREM3P0C091 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.06□□□□□ -0.16
FREM3P0C091 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.06□□□□□ -0.16
FREM3P0C091 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 AC005252.2-201ENST00000624630 1141 ntBASIC14.06□□□□□ -0.16
FREM3P0C091 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
FREM3P0C091 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.06□□□□□ -0.16
FREM3P0C091 TNRC18P2-201ENST00000417666 2714 ntBASIC14.06□□□□□ -0.16
FREM3P0C091 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
FREM3P0C091 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.05□□□□□ -0.16
FREM3P0C091 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
FREM3P0C091 AC005229.1-201ENST00000392885 409 ntBASIC14.05□□□□□ -0.16
FREM3P0C091 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
FREM3P0C091 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.05□□□□□ -0.16
FREM3P0C091 RPL7P3-201ENST00000441388 714 ntBASIC14.05□□□□□ -0.16
FREM3P0C091 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
FREM3P0C091 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.05□□□□□ -0.16
FREM3P0C091 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.05□□□□□ -0.16
FREM3P0C091 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.05□□□□□ -0.16
FREM3P0C091 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
FREM3P0C091 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
FREM3P0C091 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.05□□□□□ -0.16
FREM3P0C091 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.05□□□□□ -0.16
FREM3P0C091 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.05□□□□□ -0.16
FREM3P0C091 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.05□□□□□ -0.16
FREM3P0C091 CSF2RBP1-201ENST00000447905 391 ntBASIC14.05□□□□□ -0.16
FREM3P0C091 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
FREM3P0C091 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.05□□□□□ -0.16
FREM3P0C091 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.05□□□□□ -0.16
FREM3P0C091 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.05□□□□□ -0.16
FREM3P0C091 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FREM3P0C091 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FREM3P0C091 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FREM3P0C091 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
FREM3P0C091 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
FREM3P0C091 AC006486.2-201ENST00000624246 2199 ntBASIC14.04□□□□□ -0.16
FREM3P0C091 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.04□□□□□ -0.16
FREM3P0C091 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FREM3P0C091 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FREM3P0C091 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FREM3P0C091 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
FREM3P0C091 AL359258.3-201ENST00000622910 2331 ntBASIC14.04□□□□□ -0.16
FREM3P0C091 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FREM3P0C091 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
FREM3P0C091 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.04□□□□□ -0.16
FREM3P0C091 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.04□□□□□ -0.16
FREM3P0C091 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FREM3P0C091 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
FREM3P0C091 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
FREM3P0C091 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FREM3P0C091 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FREM3P0C091 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.04□□□□□ -0.16
FREM3P0C091 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FREM3P0C091 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms