Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALDH1A1P00352 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ALDH1A1P00352 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.41■□□□□ 0.38
ALDH1A1P00352 AC106886.4-201ENST00000623557 2502 ntBASIC17.41■□□□□ 0.38
ALDH1A1P00352 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ALDH1A1P00352 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 AC005332.8-201ENST00000622750 2735 ntBASIC17.4■□□□□ 0.38
ALDH1A1P00352 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALDH1A1P00352 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ALDH1A1P00352 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.39■□□□□ 0.38
ALDH1A1P00352 AC007613.1-201ENST00000572811 2597 ntBASIC17.39■□□□□ 0.38
ALDH1A1P00352 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ALDH1A1P00352 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
ALDH1A1P00352 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 AC004466.1-201ENST00000599515 1080 ntBASIC17.39■□□□□ 0.37
ALDH1A1P00352 AC008825.2-201ENST00000603374 718 ntBASIC17.39■□□□□ 0.37
ALDH1A1P00352 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ALDH1A1P00352 LTB4R2-202ENST00000528054 3092 ntBASIC17.39■□□□□ 0.37
ALDH1A1P00352 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALDH1A1P00352 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 E2F3P2-201ENST00000447755 1422 ntBASIC17.38■□□□□ 0.37
ALDH1A1P00352 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms