Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 AL645937.2-201ENST00000396808 931 ntBASIC15.66■□□□□ 0.1
PRAMEF11O60813 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 NME2P1-201ENST00000426182 414 ntBASIC15.66■□□□□ 0.1
PRAMEF11O60813 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 INE1-201ENST00000456273 945 ntBASIC15.66■□□□□ 0.1
PRAMEF11O60813 RN7SL837P-201ENST00000463010 287 ntBASIC15.66■□□□□ 0.1
PRAMEF11O60813 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 REXO1L4P-201ENST00000605109 1937 ntBASIC15.66■□□□□ 0.1
PRAMEF11O60813 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 AC023157.3-201ENST00000619086 2088 ntBASIC15.66■□□□□ 0.1
PRAMEF11O60813 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 AC012508.2-201ENST00000567613 1472 ntBASIC15.65■□□□□ 0.1
PRAMEF11O60813 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 AP001063.1-201ENST00000568332 529 ntBASIC15.65■□□□□ 0.1
PRAMEF11O60813 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 AC012645.4-201ENST00000610691 1061 ntBASIC15.65■□□□□ 0.1
PRAMEF11O60813 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 PRSS30P-206ENST00000641773 873 ntBASIC15.65■□□□□ 0.1
PRAMEF11O60813 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEF11O60813 AL158070.2-201ENST00000623713 1621 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms