Protein–RNA interactions for Protein: A6NKF1

SAC3D1, SAC3 domain-containing protein 1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAC3D1A6NKF1 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 AC113367.3-201ENST00000508316 1912 ntBASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 AC108073.2-201ENST00000464002 357 ntBASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 MIR1199-201ENST00000621445 119 ntBASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 CICP17-201ENST00000418553 2377 ntBASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 AC018529.2-202ENST00000611482 3087 ntBASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.62□□□□□ -0.07
SAC3D1A6NKF1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 MBLAC2-202ENST00000514906 1936 ntBASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 RPS2P1-201ENST00000434010 821 ntBASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 PRYP6-201ENST00000514804 343 ntBASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 AL009183.1-201ENST00000603760 355 ntBASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SAC3D1A6NKF1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms