Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTAGE9A4FU28 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 RHOQP3-201ENST00000437982 621 ntBASIC16.63■□□□□ 0.25
CTAGE9A4FU28 AC093909.1-201ENST00000504731 1122 ntBASIC16.63■□□□□ 0.25
CTAGE9A4FU28 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 KRT126P-201ENST00000549467 1181 ntBASIC16.63■□□□□ 0.25
CTAGE9A4FU28 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 AC096734.2-201ENST00000562054 433 ntBASIC16.63■□□□□ 0.25
CTAGE9A4FU28 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 AC011467.4-201ENST00000594891 528 ntBASIC16.63■□□□□ 0.25
CTAGE9A4FU28 AC097359.3-201ENST00000603982 1210 ntBASIC16.63■□□□□ 0.25
CTAGE9A4FU28 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 AC010507.1-201ENST00000633895 436 ntBASIC16.63■□□□□ 0.25
CTAGE9A4FU28 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTAGE9A4FU28 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 HNRNPUP1-201ENST00000554987 333 ntBASIC16.62■□□□□ 0.25
CTAGE9A4FU28 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 AC073389.1-201ENST00000595595 795 ntBASIC16.62■□□□□ 0.25
CTAGE9A4FU28 AL049840.3-201ENST00000602669 611 ntBASIC16.62■□□□□ 0.25
CTAGE9A4FU28 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 AL161645.1-201ENST00000622716 1255 ntBASIC16.62■□□□□ 0.25
CTAGE9A4FU28 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.62■□□□□ 0.25
CTAGE9A4FU28 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTAGE9A4FU28 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CTAGE9A4FU28 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTAGE9A4FU28 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms