Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NINLQ9Y2I6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NINLQ9Y2I6 REXO1L4P-201ENST00000605109 1937 ntBASIC21■□□□□ 0.95
NINLQ9Y2I6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
NINLQ9Y2I6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NINLQ9Y2I6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC21■□□□□ 0.95
NINLQ9Y2I6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
NINLQ9Y2I6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NINLQ9Y2I6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NINLQ9Y2I6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC21■□□□□ 0.95
NINLQ9Y2I6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 AC253536.4-201ENST00000440539 267 ntBASIC20.99■□□□□ 0.95
NINLQ9Y2I6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 AC079328.1-201ENST00000560358 952 ntBASIC20.99■□□□□ 0.95
NINLQ9Y2I6 EEF1DP1-201ENST00000585891 896 ntBASIC20.99■□□□□ 0.95
NINLQ9Y2I6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 AC020658.6-201ENST00000623564 1870 ntBASIC20.99■□□□□ 0.95
NINLQ9Y2I6 AC105917.1-201ENST00000506637 2539 ntBASIC20.99■□□□□ 0.95
NINLQ9Y2I6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 AL162727.3-201ENST00000635661 2787 ntBASIC20.99■□□□□ 0.95
NINLQ9Y2I6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NINLQ9Y2I6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 IGHJ2P-201ENST00000454480 60 ntBASIC20.98■□□□□ 0.95
NINLQ9Y2I6 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.98■□□□□ 0.95
NINLQ9Y2I6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 TPM3P8-201ENST00000330554 643 ntBASIC20.97■□□□□ 0.95
NINLQ9Y2I6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 Z93015.1-201ENST00000451718 390 ntBASIC20.97■□□□□ 0.95
NINLQ9Y2I6 RPL13AP20-201ENST00000459725 609 ntBASIC20.97■□□□□ 0.95
NINLQ9Y2I6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 AL354989.2-201ENST00000435838 1540 ntBASIC20.97■□□□□ 0.95
NINLQ9Y2I6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 AL360270.3-201ENST00000609118 1348 ntBASIC20.97■□□□□ 0.95
NINLQ9Y2I6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC20.97■□□□□ 0.95
NINLQ9Y2I6 MIR1202-201ENST00000408529 83 ntBASIC20.97■□□□□ 0.95
NINLQ9Y2I6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms