Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CDH9Q9ULB4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CDH9Q9ULB4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH9Q9ULB4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH9Q9ULB4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH9Q9ULB4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH9Q9ULB4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH9Q9ULB4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 AC092933.1-201ENST00000393644 945 ntBASIC16.33■□□□□ 0.2
CDH9Q9ULB4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 CROCCP4-201ENST00000457096 498 ntBASIC16.33■□□□□ 0.2
CDH9Q9ULB4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH9Q9ULB4 AL162727.3-201ENST00000635661 2787 ntBASIC16.32■□□□□ 0.2
CDH9Q9ULB4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 RNU1-114P-201ENST00000365297 166 ntBASIC16.32■□□□□ 0.2
CDH9Q9ULB4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 KLF2P2-201ENST00000416807 1039 ntBASIC16.32■□□□□ 0.2
CDH9Q9ULB4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 KRT8P35-201ENST00000483942 1338 ntBASIC16.32■□□□□ 0.2
CDH9Q9ULB4 AC106760.1-201ENST00000508690 800 ntBASIC16.32■□□□□ 0.2
CDH9Q9ULB4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH9Q9ULB4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 TMBIM7P-203ENST00000641617 1718 ntBASIC16.31■□□□□ 0.2
CDH9Q9ULB4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 AL158070.2-201ENST00000623713 1621 ntBASIC16.31■□□□□ 0.2
CDH9Q9ULB4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms